Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04789 ATGTTCATCAAATTTGCATTTGTTTGCTTTTCTGCTACCTTGTTTCTCTTCTTCACCAAAACCTCTGGGAGCCACAACACATCATCCTCACCAGCTTGTCTCACTCAACGCTGCACTTATGGACCTAACATTAGCTACCCCTTTTGGCTTACCCATGCTGATCAACTTTGCGGTTACCATGAACTTGGCCTTTTCTGTTATGGAGGCCACAACACTTTTTCTCACATAGGATTATACTATAGGGTGAAAGATATAGACTATGAGAACCATAGGCTTCAGCTGGTGGATTTGGACACTTTCAATGAAACTTGTCCCAAGGCACTTCACAGTGTTCCCTTAGGCAACCTACCTCTTACTCATTCCCCATTGAACTTAAACCTTAGCTTTTACTATAACTGCAGTAACTACCCTTCTGGGGTGCCTTCTATCCCCTGTCTCACTTCTGGGGTAAACCACTCTTTTGTGTTTGTGTTGGGGAATGAGACCAAAGGTTTTGACTGGTCGGGGAACTGTCAGGAAAATATTGTGGTGACTGTGATGAAGGATAAGATTACAAGTGATGGTGACTTAATCAGCCAGTTTGCTGGTGCCATGGATGAAGGGTTCGTGCTTGAATGGCACACTGCTTCGTACTGCGTTCAGTGTGAGGCTAGTGATGGAGTCTGTGGCTACAGTAACGCTGAGAAGGAGGTGTTGTGTTTCTGCAAAGATGGAAGTACAAAAAACAACACATGTGATGCAGGGGGAAGCAGTGCTGGTTTGTCAAGATTAATTATAGGTTTAATTATAGCTGGAGGAATTGGTGCACTGCTGACATGTGTCGTAGTTTACATTTTTGGACGAAAACTGTCACCAATTTTGTTAGAAATTCGGCTGGCCAAAAAAATTGATCGAGACATTGAGGCCTTCATCAGAAATAATGGACCTCTTCCCATAAAAAGATACTCATATTCAGATATCAAGAAAATGACCAATTCTTTTGAATCCAAACTTGGACAAGGTGGCTATGGTCAAGTATATAAAGGAAATCTACGCAACAAATCTCCCGTGGCTGTGAAGCTACTGAATGCTTCCAAGGGAAACGGGGAAGAATTTATCAACGAGGTTATAAGCATCAGCAGAACATCCCATGTAAATATTGTTAATCTCCTTGGTTTCTGTCTTGAAGGCAAGAAGAAAGCTATTATATACGATTTTATGCCCAATGGATCACTTGAAAAGTATATTCGCAACAAGAATTTAGAAACTGATCCACCTTTGAGTTGGCAAAGACTACACCACATTGCTGAAGGAATAGCCAAAGGATTGGAGTACTTGCACAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTCTGTCCTAAAATCTCTGATTTTGGGATGGCCAAGCTCTGCTCAAACACAGAAAGTATCATATCTATGTATGATGCTAGAGGGACAGTTGGGTACATAGCTCCAGAAATGTGGAATAGAAACTTTGGAGGGGTGTCATATAAATCTGATGTTTATAGTTATGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAATATCAGCATTGAAGCAAGCCATTCAAGTGAGACATATTTTCCTCATTGGATATACAAGCATGTTGAGGTGGGAAGAAGTTTAGCATTGCATGAAGGTGTGACCCCAGAGGAAAATGAAATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATTCAGACAATCCCTTCTGACAGACCTACTATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCATGGATCAATTGCAAATTCCACCTGAGCCATTCTTATTTACTCCTATGAAAACTGAAGTGGATATTTGCACCAGTAGTAGTAGCAGTGATTGA 1896 0.4082 MFIKFAFVCFSATLFLFFTKTSGSHNTSSSPACLTQRCTYGPNISYPFWLTHADQLCGYHELGLFCYGGHNTFSHIGLYYRVKDIDYENHRLQLVDLDTFNETCPKALHSVPLGNLPLTHSPLNLNLSFYYNCSNYPSGVPSIPCLTSGVNHSFVFVLGNETKGFDWSGNCQENIVVTVMKDKITSDGDLISQFAGAMDEGFVLEWHTASYCVQCEASDGVCGYSNAEKEVLCFCKDGSTKNNTCDAGGSSAGLSRLIIGLIIAGGIGALLTCVVVYIFGRKLSPILLEIRLAKKIDRDIEAFIRNNGPLPIKRYSYSDIKKMTNSFESKLGQGGYGQVYKGNLRNKSPVAVKLLNASKGNGEEFINEVISISRTSHVNIVNLLGFCLEGKKKAIIYDFMPNGSLEKYIRNKNLETDPPLSWQRLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLCSNTESIISMYDARGTVGYIAPEMWNRNFGGVSYKSDVYSYGMMILEMVGGRQNISIEASHSSETYFPHWIYKHVEVGRSLALHEGVTPEENEICKKMIIVGLWCIQTIPSDRPTMSRVVEMLEGSMDQLQIPPEPFLFTPMKTEVDICTSSSSSD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04789 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Phac2g04789 631 ProSiteProfiles Protein kinase domain profile. 325 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04789 631 Pfam Wall-associated receptor kinase C-terminal 151 238 IPR032872 -
Phac2g04789 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 618 IPR045874 GO:0004672
Phac2g04789 631 FunFam PR5-like receptor kinase 400 609 - -
Phac2g04789 631 SUPERFAMILY Protein kinase-like (PK-like) 306 599 IPR011009 -
Phac2g04789 631 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Phac2g04789 631 FunFam serine/threonine-protein kinase PBS1-like 297 399 - -
Phac2g04789 631 Gene3D Transferase(Phosphotransferase) domain 1 400 607 - -
Phac2g04789 631 Pfam Protein tyrosine and serine/threonine kinase 327 598 IPR001245 GO:0004672|GO:0006468
Phac2g04789 631 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04789 631 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Phac2g04789 631 Gene3D Phosphorylase Kinase; domain 1 304 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04789 Phac-Chr2 44594624 44597848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04789 35 611 Receptor kinase-like Gene Family AT5G38260 40.796 2.79e-139 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac2g04789 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04789 - - gmx:100781977 957.207