Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04787 ATGGCTGCCAAACGCTTTTTGGATGATTCTGATCAAGATACCAATAAGAATGGTGATAAACGGATGAGACCTACACCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTCGTCATGGTGAAGAACTTGCAGAACCTTTTCTCAGGCTTGGAACCCTTGCTTAGGAGAGTGGTGAACGAAGAGGTGGAGAGAGTGATGAGGCATTGTGTTCCACGTTCAATAACCAGGTCCCCTTCGTTGAGGATCCAAGCAATGGAGCAACCAACAAGCTATGAACTCATGTTCGAGAAGAAGCTATTGCCCAAGATATTCACAGGAAGCAGAATAGTAGACACGGATGGGAACCCCATCCTTGTTGTTCTTGTTGACAAAAGCGGTGGTCAAAAGGTTCGCACCAGTCTCCCCCACCCCATCAAGCTAGAAATCGTGGTGCTTGATGGAGATTTTCCTTCCAATAGTAGTGATAACAACGAGTCATGGACGAGTGAGGAATTCAACAACCGCATAGTGAAGGAGAGAACAGGAAAGAGGCCGTTGCTCGCAGGAGAATTGAATCTGACCATGAGGGATGGGATTGCACCAATTGAAGACATTGAATTCACTGATAATTCCAGTTGGATAAGAAGCAGGAAGTTCAGAGTTGCTGTCAGAGTTGCTCCTGGGACTAATCAAACTGTTAGAATTCGTGAAGGCATCACAGAACCAATTATTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCTATGCTCCACGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAAAAACTGTCCTCAGAGGGAATAAACACTGTGCAAGACTTTCTCAAGTTATCTGTTGTTGATGCCCAGAGGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAGAGAATGTGGGATGTGACCATCAAGCATGCAAAGACTTGTGAGAAGGGCAACAAATACTATGTCTACCGTGGGCCTAATTTTACCATCTTTATGAATTCCATATGCCAATTGCTTAGAGCTGATATCAATGGCCAAAGTTTTCCAGGAAGAGAGCTAAGCAACCTGACAAGGAGCTATATGGAAAGATTGGTGAGAGAAGCATATGCTAGATGGAATGACTTGGAGGAAATTGACGGGGCTTTGTTAAGCCAAGGGGAGAGCATGGAGCAAATTTCAAACAGTCTTCAAGCATCAGTTATAGCATATGATCAGAACGACTACTTTGGTAATACATCTGCAGAAGGAGGTAGCTATGCACCAACCCATAATGCAGAAATTGGGTGCAGTGAGTGGGGTGTGAATGCAACATTTGGCACAACATCATTAATGAGTGGCATACCTTACAGCTTCTCAGATTCTCAATCTGACAGTGACATAAGGCCCTCAGTTGATGGTGCCACAAGGTGGAACTAG 1431 0.4479 MAAKRFLDDSDQDTNKNGDKRMRPTPRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMRHCVPRSITRSPSLRIQAMEQPTSYELMFEKKLLPKIFTGSRIVDTDGNPILVVLVDKSGGQKVRTSLPHPIKLEIVVLDGDFPSNSSDNNESWTSEEFNNRIVKERTGKRPLLAGELNLTMRDGIAPIEDIEFTDNSSWIRSRKFRVAVRVAPGTNQTVRIREGITEPIIVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSSEGINTVQDFLKLSVVDAQRLRKILGVGMSERMWDVTIKHAKTCEKGNKYYVYRGPNFTIFMNSICQLLRADINGQSFPGRELSNLTRSYMERLVREAYARWNDLEEIDGALLSQGESMEQISNSLQASVIAYDQNDYFGNTSAEGGSYAPTHNAEIGCSEWGVNATFGTTSLMSGIPYSFSDSQSDSDIRPSVDGATRWN* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04787 476 Pfam Calmodulin binding protein-like N-terminal domain 91 241 IPR046831 -
Phac2g04787 476 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Phac2g04787 476 PANTHER OS02G0177800 PROTEIN 1 463 IPR012416 GO:0005516
Phac2g04787 476 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g04787 476 MobiDBLite consensus disorder prediction 457 476 - -
Phac2g04787 476 MobiDBLite consensus disorder prediction 1 23 - -
Phac2g04787 476 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04787 Phac-Chr2 44586156 44590656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04787 3 388 Calmodulin-binding Proteins AT5G57580 47.059 2.25e-114 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04787 - - vra:106766894 782.711