Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04784 ATGGCGACGCCGTTGGACGGAGGAGGAGTGGCGGTGCTCTCGAATTCCGTCAACAAGGTGGACTCCGCCTCGGCTCTCAAGGACGACTTGAAGTGCTCGAAACCGGAGTCGCCGATTTTGATTTTCTTGTTTTTTCACAAAGCAATTCGGAATGAGCTTGATGAGCTGCACCGGTTGGCCTTGGCATTCGCCACCGGAAACCACTCCGACATTCAGCCGCTCTCCGAGCGCTACCATTTCCTCAGCTCCATGTACAGGCACCACTCCAATGCTGAAGACGAGGTGATATTTCCAGCTTTAGATATACGTGTGAAGAATGTAGCACAGACATATTCTCTCGAGCACAAGGGTGAAAACAACCTTTTTGATCATCTATTTGATCTTTTAAATTCTTCTATCAATAATGATGAAACTTTTCCAAGAGAGTTAGCATCCTGCACGGGAGCTTTGCAGACGTCAGTTAGTCAACACATGGCAAAGGAAGAGGAGCAGGTATTTCCTCTGCTTATTGAGAAGTTTTCTCTGGAGGAACAGGCATCCTTAGTTTGGCAGTTCCTTTGCAGTATTCCTGTGAATATGATGGTCGATTTTCTACCATGGCTTTCAAAATCTATATCACCTGATGAATCTCAGGATTTGCGAAATTGCTTAATCAAGATAGTGCCACAGGAGAAGCTTCTTCAGAAGGTTGTTTTCACCTGGATGGAAGGGAGAGGTAGCGTTAACACGTTTGAAAGTTGTGTAGATCATTCTCAAGTTCTATGCAGTTCTAGGTCATTACCCCATCAGGTTGAGAAAGTAAACTGTGTTTGTGAGTCCACAACATGCGGAAAAAGGAAATACTCTGGATCTATGATAGATGTTTCTGATACCACTGGAGAGCATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAAAGATTTAAGTGAGATAGCAGTGGAGGCCAGAAAGATACAACACTCTGGAGATTTTGCTAATCTGTCTGCTTTTAATGAAAGATTTCAATTTATAGCCGATGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCGAGCAGTAGATGGGGAATTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGAAGTTTAATTGAAAGTATTCAAAGTGAAGGAGCATCATCTAATTCAGATGTTGAATTTTACTCCAAGTTATGCACTCATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTACTTCCTCTGGCAAGAAAGCACTTTAGCTTTAGAAGGCAATGTGAACTTTTGTATCAAAGTTTATGTATGATGCCTCTTAAATTGATTGAGCGTGTCCTGCCATGGTTGGTAGGATCTTTAACTGAAGATGAAGCAAAGATGTTTCGGAGAAATATGCAGTTGGCAGCTCCAGCAACAGATTCTGCTCTAGTTACACTCTTCTGTGGATGGGGTTGCAAGGCTCGTAATGAAGGTCAGTGTTTGTCTTCAGGTGCATCAGGTTTCTGTCCTGCTCAAACACTTTTTGATATTGAAGAAAATATTGGTCCATTATCCTGTGCTTGTGCATCTGCATTATCTAATAGACATTGCTCAGTATTAGCTGAGTCAGGAGAGAACAAAAAAGCAGTCAAACGAAACATAATGGAGTTGAACAAAAATGAAGATGTGCCAGAAACTTCAGAGACTGAAAGCATTCAGAAACAATGTTGTAGTACTCGGTCTTGTTGTGTGCCAGGTTTGGGAGTGAGTAGTAACAATTTAGGGTTGAGTTCTCTCTCTTCGCCGCCCAAGTCTTTGCGCTCCTTGTCTTTCAGCTCTTCTGCTCCATCTATTAATTCAAGTCTGTTAGTAATGGAAACAGAGAGAAGCTCATGCAATGTGGGATGTACACAAAGACCAATTGATACAATCTTTAAATTCCATAAAGCCATACGCAAAGACTTGGAGTACCTTGATGTTGAATCGGGAAAGCTGAGTGATGGTGATGAGACAATTCTGCGTCAATTTAATGGAAGATTTCGACTCTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTCCCAGCTTTGGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCATACATGCTAGACCATAAGCAGGAAGAAAAATTGTTTGAAGATATTTCCTGTGTTCTTTCAGAGTTTTCCGTCCTTCATGAATCCTTGCAGATGATCCACATGGCTGAGAGTTTAAGTGAAAGTAATTTTGGAACCTCTGATGGCAATACTAGTGATGTCATCAAAAAATATAATGAACTTGCTACTAAGCTTCAGGGGATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATCTCTTCAGAGAAGAATGTGAACTGTGGCCATTGTTTGGGAGACATTTTACTGTGGAAGAACAAGACAAGATAGTGGGTCGGATAATTGGAACAACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACATCTGCTCTTACTCAGGATGAACAGAACAGAATGATGGATACATGGAAGCAAGCAACAAAGAACACTATGTTCAATGAATGGCTTAGTGAATGCTGGAAAGAGAGTCCAGTGTCTATACCACAGGCTGAAGCATCAGATCAAAGCACTTTTCGGAGAGGTGCTGAATATCGAGAAAGCTTGGGCCACGATGATCCAATGTTCAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGGAAGGTATATCGAGACTCAACACTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATTTATTGACAAGTCGCTGGATAGCTGCCCAGCAGAAATCACCTAAAGCTCTGTCGGAAGGATCATCTAACAGTGTAGGAATAGTAGGACTCTCACCATCCTTTCGAGACCCAGAGAAACATGTATTTGGGTGTGATCACTATAAGAGAAATTGCAAGCTTCGGGCTGAATGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACAATGTCAGTGATCACTCAATGGATAGAAAAGCAACATTGGAAATGATGTGTATGCGCTGCCTGAATATACAGCCAATAGGGCCTACGTGCATGACACCTTCATGTAATGGATTTTCAATGGCGAAGTACTATTGCAGTATATGCAAATTTTTTGATGATGAAAGGAACGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGACAAGGACTTGGGATCGATTATTTTCATTGCATGAAATGCAATTGTTGCCTGGGGATTAAATCAGCATCTCATAAATGTCTCGAGAAAGGTTTAGAAATGAACTGCCCGATTTGTTGCGATGACTTGTTCACTTCAAGTGCTACGGTCAGAGCTCTACCTTGCGGCCACTATATGCACTCTGCTTGCTTCCAGGCATACACGTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCCCTATTGGCTGCTGAGGAGCTTCCTGAAGAGTACAGGGAACGCTGTCAGGACGTACTCTGCCATGACTGTGGTCGGAAGGGCTCTTCACGGTTCCACTGGTTGTACCACAAATGTGGATTCTGTGGCTCTTACAATACCCGGGTTATCAAGTGTGAGACGTCAAACTCCAGCTGCTCTTAG 3714 0.4206 MATPLDGGGVAVLSNSVNKVDSASALKDDLKCSKPESPILIFLFFHKAIRNELDELHRLALAFATGNHSDIQPLSERYHFLSSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGENNLFDHLFDLLNSSINNDETFPRELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMVDFLPWLSKSISPDESQDLRNCLIKIVPQEKLLQKVVFTWMEGRGSVNTFESCVDHSQVLCSSRSLPHQVEKVNCVCESTTCGKRKYSGSMIDVSDTTGEHPIDEILLWHNAIKKDLSEIAVEARKIQHSGDFANLSAFNERFQFIADVCIFHSIAEDKVIFRAVDGEFSFFQEHAEEESQFNDFRSLIESIQSEGASSNSDVEFYSKLCTHADHIMETIQRHFHNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFRRNMQLAAPATDSALVTLFCGWGCKARNEGQCLSSGASGFCPAQTLFDIEENIGPLSCACASALSNRHCSVLAESGENKKAVKRNIMELNKNEDVPETSETESIQKQCCSTRSCCVPGLGVSSNNLGLSSLSSPPKSLRSLSFSSSAPSINSSLLVMETERSSCNVGCTQRPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFNGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCVLSEFSVLHESLQMIHMAESLSESNFGTSDGNTSDVIKKYNELATKLQGMCKSIRVTLDQHLFREECELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNRMMDTWKQATKNTMFNEWLSECWKESPVSIPQAEASDQSTFRRGAEYRESLGHDDPMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKSPKALSEGSSNSVGIVGLSPSFRDPEKHVFGCDHYKRNCKLRAECCGKLFTCRFCHDNVSDHSMDRKATLEMMCMRCLNIQPIGPTCMTPSCNGFSMAKYYCSICKFFDDERNVYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRERCQDVLCHDCGRKGSSRFHWLYHKCGFCGSYNTRVIKCETSNSSCS* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04784 1237 Gene3D nmb1532 protein domain like 36 187 - -
Phac2g04784 1237 Gene3D nmb1532 protein domain like 298 445 - -
Phac2g04784 1237 SUPERFAMILY CHY zinc finger-like 985 1048 IPR037274 GO:0008270
Phac2g04784 1237 CDD RING-H2_Pirh2-like 1120 1163 - -
Phac2g04784 1237 SUPERFAMILY RING/U-box 1119 1166 - -
Phac2g04784 1237 Pfam Hemerythrin HHE cation binding domain 295 429 IPR012312 -
Phac2g04784 1237 Pfam Hemerythrin HHE cation binding domain 645 808 IPR012312 -
Phac2g04784 1237 Pfam Hemerythrin HHE cation binding domain 43 169 IPR012312 -
Phac2g04784 1237 Gene3D - 1192 1233 - -
Phac2g04784 1237 Gene3D nmb1532 protein domain like 642 880 - -
Phac2g04784 1237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1117 1165 IPR013083 -
Phac2g04784 1237 Coils Coil 545 565 - -
Phac2g04784 1237 CDD Hr-like 298 427 - -
Phac2g04784 1237 Pfam Ring finger domain 1120 1162 IPR001841 -
Phac2g04784 1237 SMART ring_2 1121 1162 IPR001841 -
Phac2g04784 1237 Pfam Zinc-ribbon 1168 1225 IPR039512 -
Phac2g04784 1237 CDD Hr-like 41 167 - -
Phac2g04784 1237 ProSiteProfiles Zinc finger CHY-type profile. 985 1054 IPR008913 GO:0008270
Phac2g04784 1237 ProSiteProfiles Zinc finger RING-type profile. 1121 1163 IPR001841 -
Phac2g04784 1237 SUPERFAMILY Zinc hairpin stack 1058 1114 IPR037275 -
Phac2g04784 1237 CDD Hr-like 647 807 - -
Phac2g04784 1237 Pfam CHY zinc finger 992 1067 IPR008913 GO:0008270
Phac2g04784 1237 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 688 1234 - -
Phac2g04784 1237 FunFam Zinc finger protein-related isoform 1 1116 1165 - -
Phac2g04784 1237 ProSiteProfiles Zinc finger CTCHY-type profile. 1057 1120 IPR017921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04784 Phac-Chr2 44551184 44562425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04784 1 1237 C2H2 Transcription Factor Family AT3G18290 65.293 0.0 1665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04784 K16276 - gmx:100801725 2257.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04784 2 44551184 44562425 Phac2g04784 2 44551184 44562425 ECH