Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04777 ATGTACACGTCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCAACTGAGTTTGAGGAGTCAGTTGGGCAGGCTTTGTTTGATTTGGAAAACACCAACCAGGAGCTTAAAAGTGATCTGAAGGACCTGTACATTAATTCAGCAATCCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTTGTCATTCATGTTCCATACAGATTAAGGAAGGGTTTCCGCAAGATTCACGTTAGGCTTGTCCGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTATCTTGGTTGCCACCCGGAGGATATTGAGGCCACCAAAGAAGGGTTCTGCTGTTCAGCGTCCCCGCAGCCGTACTCTTACTGCAGTTCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGCGTGAGGTATAGAATTGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCTAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACATTTGCTGCAGTGTACAGGAAGCTTTCGGGCAAAGATGTTGTGTTTGAGTATCCTGCCACAGAGGCTTAG 576 0.4635 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAIQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPATEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04777 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phac2g04777 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phac2g04777 191 Coils Coil 27 47 - -
Phac2g04777 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04777 Phac-Chr2 44517234 44519752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04777 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 4.12e-115 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04777 K02993 - gmx:100499757 366.696