Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04773 ATGTCTACTTCAAAGAGCGTCAGCAGTTCTAGTGAAGATGACAATGAACTTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATTTGCTCTCCCAATACATTTCTACTCACGGGGAAGGGCGATGGAACTTGCTGGCTAAACGTTCAGGATTGAAGAGAACTGGAAAAAGTTGCAGATTAAGGTGGCTAAATTATCTAAAACCAGATGTGAAACGGGGAAATTTAACCCCACAAGAGCAACTTTTGATTCTTGAACTTCACTCAAAGTGGGGAAACAGGTGGTCAAAAATTGCACAACACTTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAGAACTAGGATTCAGAAACAAGCCAGACATTTGAAAATTGACATTGACAGCAGAGAATTTCAAGAACTTGTAAGGCGTTTTTGGATGCCAAGATTGCTTCAGAAAGCAAAAGAGTCATCATCATCATCTTCTTCAGTCATGCCAATTCAGAACCAGGCAATTCCTTTGCTTCTTGATGATGGAGTCTCTCAACAGTCAGCTGTTGGGAGCATACCATGGCAGGGACCTTGTATGAGTATGAATGGAGGTAGTTCCACTTATATGGAGCAACATGAGCAGAACTCAGACTCTGAACACAACAGTGGTTCATGCATCTCCTTTTCTGAGTCAGCAAATATTCCAAAAGTGTCTCAGCATTTTGGACACACCATAGACCAATTCCATGGCTTAAGCAACAATGAGTTTGGCCCTTTCTCATATGATGGTTATCATGTAAGTGACAATGCCTATGAGATGAACACCTTCAAAACAACAACTGCAAGGGTGGCTCAGGATTTTCAATACCCAGTTGGTGATTGTCAAACGGCAGCAACTGGTTGGCTAAGCAACGATTTTGCATGTACCATGTGGAACACGGATGAACTGTGGCAGTTTAGCAAGTTACAAAAATAA 951 0.4185 MSTSKSVSSSSEDDNELRRGPWTLEEDNLLSQYISTHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLKIDIDSREFQELVRRFWMPRLLQKAKESSSSSSSVMPIQNQAIPLLLDDGVSQQSAVGSIPWQGPCMSMNGGSSTYMEQHEQNSDSEHNSGSCISFSESANIPKVSQHFGHTIDQFHGLSNNEFGPFSYDGYHVSDNAYEMNTFKTTTARVAQDFQYPVGDCQTAATGWLSNDFACTMWNTDELWQFSKLQK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04773 316 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Phac2g04773 316 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Phac2g04773 316 MobiDBLite consensus disorder prediction 198 217 - -
Phac2g04773 316 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Phac2g04773 316 FunFam MYB transcription factor 75 117 - -
Phac2g04773 316 Gene3D - 19 71 - -
Phac2g04773 316 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 206 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac2g04773 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Phac2g04773 316 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Phac2g04773 316 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Phac2g04773 316 CDD SANT 76 115 IPR001005 -
Phac2g04773 316 FunFam Myb transcription factor 19 71 - -
Phac2g04773 316 Gene3D - 75 118 - -
Phac2g04773 316 SMART sant 18 68 IPR001005 -
Phac2g04773 316 SMART sant 71 119 IPR001005 -
Phac2g04773 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Phac2g04773 316 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04773 Phac-Chr2 44505783 44507852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04773 14 311 MYB Transcription Factor Family AT1G68320 47.557 5.83e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g04773 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04773 K09422 - gmx:778042 520.776