Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04772 ATGGCCCAATTCACTGCACATTTCCAAAGCTTTAGACCCTCCTTTCCTTTTTTAGATATCGATAACATGGAAATTCAAAACTTGCTGCCATTTGATGACACCTTATTGGCCTCTCCAGAACCTCAATTTCCACCAAACTTGGAAGGAAATTTTCCTGCTCCTTTTCAATGTGTGGATCACAATGCAGTTCCAGTGCTAGTTCCTAATGAAGTCCATGAAGGTAAAAAAAGGGAAGCAACTGATGTGTGTGATCCCAGTTCTGGTAACTCAACTCCTGATATTTCTGAGAGTGGAAGCAAGACAAAAAATAGTTCTGCAAGAGGCAAGAGAGTGAAAAGGAATGCGGTAGAAGACAATAAACCAAACCAAGTAGTTCATGTTAGAGCCAAAAGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTTAGAAGAGGGAAAATCAATGAAAAACTTAGGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAATAATGTTGGACGAGATCATAAACTATGTTCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTAGTGCAGCAAGTAGCTATTATGACTTCAATTCAGAGTCAGATGCTTTGGAAACAATGCAGAGAGCAAAGGCATCCGAGGCAAAAGAGTTAGGAGAAGGAAGTGAAGGAGTTTCTTGCTTTGAAGCAACATGGCCATGGTCCCTGTAA 729 0.417 MAQFTAHFQSFRPSFPFLDIDNMEIQNLLPFDDTLLASPEPQFPPNLEGNFPAPFQCVDHNAVPVLVPNEVHEGKKREATDVCDPSSGNSTPDISESGSKTKNSSARGKRVKRNAVEDNKPNQVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLSAASSYYDFNSESDALETMQRAKASEAKELGEGSEGVSCFEATWPWSL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04772 242 MobiDBLite consensus disorder prediction 83 104 - -
Phac2g04772 242 SMART finulus 139 189 IPR011598 GO:0046983
Phac2g04772 242 Gene3D - 130 202 IPR036638 GO:0046983
Phac2g04772 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 183 IPR011598 GO:0046983
Phac2g04772 242 FunFam transcription factor BEE 3-like 130 201 - -
Phac2g04772 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 201 IPR036638 GO:0046983
Phac2g04772 242 MobiDBLite consensus disorder prediction 69 140 - -
Phac2g04772 242 CDD bHLH_AtBPE_like 124 208 - -
Phac2g04772 242 Pfam Helix-loop-helix DNA-binding domain 137 184 IPR011598 GO:0046983
Phac2g04772 242 MobiDBLite consensus disorder prediction 110 140 - -
Phac2g04772 242 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 87 211 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04772 Phac-Chr2 44496076 44497962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04772 7 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 53.086 7.46e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g04772 HLH 0.00022 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04772 - - vun:114179606 396.741