Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04752 ATGAGAGACATGAAAGACGCAGGTGCCTTGGGAGCCAAGACTGCACGAGCCTGCGATAGCTGCATAAGCAGAAGAGCGAGATGGTTCTGTGCAGCTGATGATGCTTTTCTCTGCCATGGCTGCGACACTTTGGTTCATTCCGCCAACCAGTTAGCTAGCAGACACGAAAGGGTTCGCCTTCAAACTGCATCCTCTAAGGTAACCACCACCACGCACGCATGGCACAGTGGATTCACACGCAAGGCAAGAACCCCACGTCACAACAACAACAACAAGCACTCTGCACTGCAGCAACGTCTCAAAGAAGAAGTTCTCTTCAACAACGGCAGTGTTCTTCCCCTGGTTCCGGAGCTGGGAGGGGAAGAACAAGAACCTGTGGTTGTGGATAATGATGAGACGGAGGAACAGATGCTATGTCGTGTGCCCGTATTCGACAATTACGATGTGAGAACGGATGACTTGGACAGTTTTTCCGACATGGATTTCGCTGAGTTTGCTGCTGATGTTGAAAACCTGCTTGTTAAAGAAGACGATGAAATAAGTGCGTGTGTGGGAGGGGGAGTTGAGGGTGCAATGGCGAAGGTTAAGGATGAAGAGGATGTTGATGGTGATGTAGCGTGTTATCTGGAGTCAGTTTTTGACATGACCAATGATGATACCCTTCATTGGAATAGCATTGAGTCTGTGCTGTCAGATGCAGGGGAAGAGAAGGCATGTGTGGTGGCGAGTGATGGTGGTGTTGGTGAAGAAGAAGGAACAAAGAGAGACATATTTTTGAGACTTAACTACGATGAGGTTATAACTGCATGGTCTACCCAAGGTTCTTCTCCCTGGACAACTTCAAACCCACCTAAGTTCAACTCCGGCTATGACTTCTGCTTGGGTCTGAGTGGTGTAGATGGGGAAGTAAGAAGCTTAAGGGGTCACCTAGACGGTGGAAGAGAGGCAAGAGTGTCGAGGTACAGAGAGAAGAGAAGGACTCGTTTGTTTGCAAAGAAAATTAGATATGAAGTAAGAAAGTTGAACGCAGAGAAAAGGCCAAGAATGAAAGGTCGTTTTGTGAAGAGAACATGCTTTGTTGGAGTCAATGCTTTTCCTGCTTACCAATGA 1110 0.4757 MRDMKDAGALGAKTARACDSCISRRARWFCAADDAFLCHGCDTLVHSANQLASRHERVRLQTASSKVTTTTHAWHSGFTRKARTPRHNNNNKHSALQQRLKEEVLFNNGSVLPLVPELGGEEQEPVVVDNDETEEQMLCRVPVFDNYDVRTDDLDSFSDMDFAEFAADVENLLVKEDDEISACVGGGVEGAMAKVKDEEDVDGDVACYLESVFDMTNDDTLHWNSIESVLSDAGEEKACVVASDGGVGEEEGTKRDIFLRLNYDEVITAWSTQGSSPWTTSNPPKFNSGYDFCLGLSGVDGEVRSLRGHLDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTCFVGVNAFPAYQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04752 369 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Phac2g04752 369 Pfam CCT motif 314 356 IPR010402 GO:0005515
Phac2g04752 369 Pfam B-box zinc finger 15 58 IPR000315 GO:0008270
Phac2g04752 369 CDD Bbox1_BBX-like 17 60 - -
Phac2g04752 369 SMART bboxneu5 13 60 IPR000315 GO:0008270
Phac2g04752 369 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 357 - -
Phac2g04752 369 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04752 Phac-Chr2 44429692 44431670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04752 7 356 C2C2-CO-like Transcription Factor Family AT1G25440 42.857 8.77e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac2g04752 zf-B_box 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04752 - - vun:114176987 700.664