Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04750 ATGCAAAAGTGTGAGATGGAATCGTTGAATGAAGTTTGTGAAGAAAGGAAACTGCGGATTTCATTCAGTGACCCAGATGCTACAGATAGTGAAGAAGAGAGTGAAGTAGGAAATGGAGAGAGTAAGAGAAATGGTTCAAGGAGAGTTGTTGTAGAGATGAAGTTTCCAAGCATGGTAGATGAAGCAAACAAAAATGCAGAGACAAAAGCAGAAAAAGGAACCAGCATGGCAAAAGGTGTGAGACTGAGACCATGGGGAAAATATGCAGCTGAGATACGAGTCCCTTTTGAAAATCGCAGAGTGTGGCTTGGTACTTTTAATACTGAGAAAGAGGCTTCAATGGCTTATAATAAAAAGAGGGAAGAGTTTGACAACAAAAAAGCTCTTCTAAAAGCAGATGCATCAGGGCATTCAAAGGCTGCAAAAATGGATTTTCCTCATCTTCCTTCTCAACCATCTTAG 462 0.4026 MQKCEMESLNEVCEERKLRISFSDPDATDSEEESEVGNGESKRNGSRRVVVEMKFPSMVDEANKNAETKAEKGTSMAKGVRLRPWGKYAAEIRVPFENRRVWLGTFNTEKEASMAYNKKREEFDNKKALLKADASGHSKAAKMDFPHLPSQPS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04750 153 Pfam AP2 domain 78 124 IPR001471 GO:0003700|GO:0006355
Phac2g04750 153 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 131 - -
Phac2g04750 153 MobiDBLite consensus disorder prediction 35 49 - -
Phac2g04750 153 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Phac2g04750 153 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Phac2g04750 153 SMART rav1_2 78 139 IPR001471 GO:0003700|GO:0006355
Phac2g04750 153 Gene3D AP2/ERF domain 78 146 IPR036955 GO:0003700|GO:0006355
Phac2g04750 153 MobiDBLite consensus disorder prediction 133 153 - -
Phac2g04750 153 SUPERFAMILY DNA-binding domain 75 128 IPR016177 GO:0003677
Phac2g04750 153 CDD AP2 78 117 IPR001471 GO:0003700|GO:0006355
Phac2g04750 153 MobiDBLite consensus disorder prediction 20 78 - -
Phac2g04750 153 ProSiteProfiles AP2/ERF domain profile. 76 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04750 Phac-Chr2 44414792 44415424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04750 47 131 AP2-EREBP Transcription Factor Family AT1G49120 46.154 1.30e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g04750 AP2 9.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04750 - - vun:114178173 189.889