Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04736 ATGACTGAAACTAAGTCAACTGGTAAGATGATTAAGAAACAAGACACAAAAAAGGTTTCTAGTTTCAGCCATCAGCCATCTAGAAAGCAGTCTCGGAAGGGTGAAAATCCCACTCGACTCATACCTCCTCCTGACCAGTCTTCTGATTTTGGCCATTCAAACACTTGGATCTGTAAAAATGCTGCTTGTAGAGCTGTTCTGTCTATAGATGACACATTCTGTAGAAGATGCTCTTGCTGTATTTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATCTGAATCTACTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAATGTGCCCTTTTACATAAAAAGGTGGGGGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCTTGTGGTAAAGTTACGGGGATACTTGGATGTTGGAAGAAGCAGCTAAGTATTGCTAAGGATGCCCGACGTGTGGATGTACTCTGTTACAGGATATATTTGAGCTACAGGCTCCTGGATGGAACCACAAAATTCAAAGACTTGCATCAAACAGTTCAAGAGGCGAAGGCTAAGCTGGAGACAGAAGTTGGCCCTGTGAATGGCGTTTCTGCCAAGATGGCTCGAGGCATTGTCAGCAGACTCCCTATTGCTAGTGATATACAGAAACTCTGTTCACTTGCTATTGAGAAAGCTGACAGGTGGCTTGCCACTGTTCTGAATGTAAACTCGGATTCTGCAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAACTTCCTCGGTCAAAATCATTTTAATTGAAATATCAAATATATGCTCTGAGGAGATTAAGGGATACAAGCTCTGGTATTACAAGAGTCGGGATGAATCACCCACCAAAGATCCTGTTTCCGTGTTTCCCAAGTCTCAGAGGAGGATTTTGATATCCAACCTCAACCCTTGCACAGAATATACTTTTAGGATTATATCTTACACAGATACACGTGACCTGGGTCATTCTGAGGCTAAGTGTTTTACCAAGAGCATCGAGGTAATTAAAAATAACCCCTCCTCGTCTGTTGCTATTAATCACGAAAAAGAGAACCTTCTATCTAGGGGCAATTCTTCGGGATCCAAGATGGTGCCAAATGACACACTGAGCAGCTATGGATTCAAGGTTCGAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTCAAGAACAAGGTTACTTGGAAGAGTTTTGCTGTGTCAATATGAAAGATTGCTGCGGACAGAGTGAACGGTTAGATAAACCAAGAATTCCAGAAGCACAGTTGCCCTCAGTTACTCGAGGCCTTGATTTAAATGTTGTTTCAGTTCCTGATTTAAATGAAGAGCTAACACCTCCGTTTGAGTATTCTAGGGATGAAGATAATGGTTGCTCTTTGTTGCAAACTGTGGAGGGAGACGATGATGCTGCTTCTCATGATCTAGACAAAAATGGTTTGGCAAGATCACATGGGAGTGGGGATTCTCAAACCTGGACCCATGGGCCAACAGGAGAAGTATCTGCTGTTGATTCACGCATAGATATGTGCAGAAAAAGGATAGCAAGCACAGTGGAAGAGACACATGATTGTGACAGCACTTTAATTAACGGTTCTCCTTTACGTATATGTGATGGTTCATGTTCCTTGGATGAGAACTTTGAGTACTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAGTTGCTAACATGGTTTAGTTTAAGGGCGACAGAGCAAGAACGCAGGGTGGTTAATACCTTCATTCAGACTCTTATGGATGATCCGAGTAGTTTGGCAGGGCAACTGGTAGACTCTTTTTATGATATTATATCCAACAAGAGACAAAAAAATGGATTCAGTAGTGAAGCTGGGGCATCAAATTAA 1956 0.4233 MTETKSTGKMIKKQDTKKVSSFSHQPSRKQSRKGENPTRLIPPPDQSSDFGHSNTWICKNAACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALLHKKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLSIAKDARRVDVLCYRIYLSYRLLDGTTKFKDLHQTVQEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDIQKLCSLAIEKADRWLATVLNVNSDSAEGSLPAACKFVFEEVTTSSVKIILIEISNICSEEIKGYKLWYYKSRDESPTKDPVSVFPKSQRRILISNLNPCTEYTFRIISYTDTRDLGHSEAKCFTKSIEVIKNNPSSSVAINHEKENLLSRGNSSGSKMVPNDTLSSYGFKVRDLGKILRLAWAQEQGYLEEFCCVNMKDCCGQSERLDKPRIPEAQLPSVTRGLDLNVVSVPDLNEELTPPFEYSRDEDNGCSLLQTVEGDDDAASHDLDKNGLARSHGSGDSQTWTHGPTGEVSAVDSRIDMCRKRIASTVEETHDCDSTLINGSPLRICDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRATEQERRVVNTFIQTLMDDPSSLAGQLVDSFYDIISNKRQKNGFSSEAGASN* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04736 651 CDD FN3 287 338 IPR003961 GO:0005515
Phac2g04736 651 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Phac2g04736 651 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Phac2g04736 651 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 645 IPR044514 GO:0010048|GO:0040029
Phac2g04736 651 MobiDBLite consensus disorder prediction 504 519 - -
Phac2g04736 651 MobiDBLite consensus disorder prediction 1 48 - -
Phac2g04736 651 Pfam Fibronectin type III domain 263 339 IPR003961 GO:0005515
Phac2g04736 651 MobiDBLite consensus disorder prediction 492 519 - -
Phac2g04736 651 Gene3D Immunoglobulins 245 347 IPR013783 -
Phac2g04736 651 MobiDBLite consensus disorder prediction 1 19 - -
Phac2g04736 651 SUPERFAMILY Fibronectin type III 263 339 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04736 Phac-Chr2 44258522 44266708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04736 54 642 PHD Gene Family AT3G24440 48.845 1.53e-179 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04736 - - gmx:100816128 1218.37