Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04733 ATGGATTTAGAAGAGAAGTTCCTGGCTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGTACTCTGGAAAAAAATGGCCACTCTGATGGTGCTTCAAAAAGTTCAGAACTCCTTCAGCAGTTTGTAAAATGTGGTCTGAAGAAGGAACTTCTTCGAACGTGTGTTGATAAGGACAAAAAAAACATTTCAATTAAAAGCAGGATGACTGAAACTAAGTCAACTGGTAAGATGATTAAGAAACAAGACACAAAAAAGGTTTCTAGTTTCAGCCATCAGCCATCTAGAAAGCAGTCTCGGAAGGGTGAAAATCCCACTCGACTCATACCTCCTCCTGACCAGTCTTCTGATTTTGGCCATTCAAACACTTGGATCTGTAAAAATGCTGCTTGTAGAGCTGTTCTGTCTATAGATGACACATTCTGTAGAAGATGCTCTTGCTGTATTTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATCTGAATCTACTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAATGTGCCCTTTTACATAAAAAGGTGGGGGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCTTGTGGTAAAGTTACGGGGATACTTGGATGTTGGAAGAAGCAGCTAAGTATTGCTAAGGATGCCCGACGTGTGGATGTACTCTGTTACAGGATATATTTGAGCTACAGGCTCCTGGATGGAACCACAAAATTCAAAGACTTGCATCAAACAGTTCAAGAGGCGAAGGCTAAGCTGGAGACAGAAGTTGGCCCTGTGAATGGCGTTTCTGCCAAGATGGCTCGAGGCATTGTCAGCAGACTCCCTATTGCTAGTGATATACAGAAACTCTGTTCACTTGCTATTGAGAAAGCTGACAGGTGGCTTGCCACTGTTCTGAATGTAAACTCGGATTCTGCAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAACTTCCTCGGTCAAAATCATTTTAATTGAAATATCAAATATATGCTCTGAGGAGATTAAGGGATACAAGCTCTGGTATTACAAGAGTCGGGATGAATCACCCACCAAAGATCCTGTTTCCGTGTTTCCCAAGTCTCAGAGGAGGATTTTGATATCCAACCTCAACCCTTGCACAGAATATACTTTTAGGATTATATCTTACACAGATACACGTGACCTGGGTCATTCTGAGGCTAAGTGTTTTACCAAGAGCATCGAGGTAATTAAAAATAACCCCTCCTCGTCTGTTGCTATTAATCACGAAAAAGAGAACCTTCTATCTAGGGGCAATTCTTCGGGATCCAAGATGGTGCCAAATGACACACTGAGCAGCTATGGATTCAAGGTTCGAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTCAAGAACAAGGTTACTTGGAAGAGTTTTGCTGTGTCAATATGAAAGATTGCTGCGGACAGAGTGAACGGTTAGATAAACCAAGAATTCCAGAAGCACAGTTGCCCTCAGTTACTCGAGGCCTTGATTTAAATGTTGTTTCAGTTCCTGATTTAAATGAAGAGCTAACACCTCCGTTTGAGTATTCTAGGGATGAAGATAATGGTTGCTCTTTGTTGCAAACTGTGGAGGGAGACGATGATGCTGCTTCTCATGATCTAGACAAAAATGGTTTGGCAAGATCACATGGGAGTGGGGATTCTCAAACCTGGACCCATGGGCCAACAGGAGAAGTATCTGCTGTTGATTCACGCATAGATATGTGCAGAAAAAGGATAGCAAGCACAGTGGAAGAGACACATGATTGTGACAGCACTTTAATTAACGGTTCTCCTTTACGTATATGTGATGGTTCATGTTCCTTGGATGAGAACTTTGAGTACTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAGTTGCTAACATGGTTTAGTTTAAGGGCGACAGAGCAAGAACGCAGGGTGGTTAATACCTTCATTCAGACTCTTATGGATGATCCGAGTAGTTTGGCAGGGCAACTGGTAGACTCTTTTTATGATATTATATCCAACAAGAGACAAAAAAATGGATTCAGTAGTGAAGCTGGGGCATCAAATTAA 2166 0.4197 MDLEEKFLAKVSGVQSLSSSVQSTLEKNGHSDGASKSSELLQQFVKCGLKKELLRTCVDKDKKNISIKSRMTETKSTGKMIKKQDTKKVSSFSHQPSRKQSRKGENPTRLIPPPDQSSDFGHSNTWICKNAACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALLHKKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLSIAKDARRVDVLCYRIYLSYRLLDGTTKFKDLHQTVQEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDIQKLCSLAIEKADRWLATVLNVNSDSAEGSLPAACKFVFEEVTTSSVKIILIEISNICSEEIKGYKLWYYKSRDESPTKDPVSVFPKSQRRILISNLNPCTEYTFRIISYTDTRDLGHSEAKCFTKSIEVIKNNPSSSVAINHEKENLLSRGNSSGSKMVPNDTLSSYGFKVRDLGKILRLAWAQEQGYLEEFCCVNMKDCCGQSERLDKPRIPEAQLPSVTRGLDLNVVSVPDLNEELTPPFEYSRDEDNGCSLLQTVEGDDDAASHDLDKNGLARSHGSGDSQTWTHGPTGEVSAVDSRIDMCRKRIASTVEETHDCDSTLINGSPLRICDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRATEQERRVVNTFIQTLMDDPSSLAGQLVDSFYDIISNKRQKNGFSSEAGASN* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04733 721 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 715 IPR044514 GO:0010048|GO:0040029
Phac2g04733 721 MobiDBLite consensus disorder prediction 574 589 - -
Phac2g04733 721 Pfam Fibronectin type III domain 333 409 IPR003961 GO:0005515
Phac2g04733 721 MobiDBLite consensus disorder prediction 69 89 - -
Phac2g04733 721 CDD FN3 357 408 IPR003961 GO:0005515
Phac2g04733 721 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Phac2g04733 721 SUPERFAMILY Fibronectin type III 333 409 IPR036116 GO:0005515
Phac2g04733 721 Gene3D Immunoglobulins 315 417 IPR013783 -
Phac2g04733 721 MobiDBLite consensus disorder prediction 562 589 - -
Phac2g04733 721 MobiDBLite consensus disorder prediction 69 118 - -
Phac2g04733 721 MobiDBLite consensus disorder prediction 13 37 - -
Phac2g04733 721 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04733 Phac-Chr2 44258151 44266708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04733 124 712 PHD Gene Family AT3G24440 48.845 2.83e-179 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04733 - - gmx:100816128 1320.45