Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04731 ATGGCTAGTCGACTGAAGGAGGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTTAAACTCGCCCCGAATCGAAGATGTATTAACTGTAACAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTATGCACTAACTGTAGCGGAATACACCGAGAATTTACACATAGGGTAAAATCAATTTCAATGGCCAAATTTACTGCACAAGAAGTTGGTTCACTTCAAGAAGGTGGAAATCAGCGTGCAAAAGAAATCTATTTTAAAGAATGGGACCCACAACTTCATTCTTTTCCCGATAGCAGCCATGTTGGCAGGCTCCGCGATTTCATCAAGCACGTTTATGTGGATAGAAGATTCAGTGGTGAGAGGACCAATGATAAACCTCCAAGAGTAAAGGGTGACAAGGATGATTTCTATGAAAACAAGAGGACAGAGACATATCAGGGTGGATCTAAAAGCCCTGCATATGAGGACCGTTTCAGCGATAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAATGGGCAATATGGTGATTACAGAATAAGTCCTAGTCGTCCTGCTATAATCAATGACTGGCATCGAGAAGAACGGTTTGGGGATGGACGAAAATATGAAGATCAGAGAATATCTGATGGAAATCATAAGGGGGAAAGCCATTCTCCTGATTCTTCCAGCCCCCCTGTGGTCCGACCTGTTAGAGAAATCTTGGGTGAAAATGTAGTACCTCTTCGAATAAGTGAACCACCCAAAACAAACAGTGGACAGGCTGTTAATGGCTCAACACTCACACAGAGAACTTCATCTTCCAGTACCTTAGCATCCAGCCATGTTACCCAGACAGAAGTTAAGCCGGAGACTATTAAGAGCCTTATTGATTTTGATGATGATCCTGAACCATCTGTTGCTCCAGCAATTTCTCAAGCCCAGCAAACTGCTGTTGCTCAACTCGGGATGCCTGTAAATTCCAATGATAATAATTGGGCCTCTTTTGATTTTGCTCCTGAGGCAAAAGCACCTCAGGGTCCTTCAAACGTAAATCCACTTGAATCCGTTCTGACACAATTGACTGTACCAGTATATGTACCTTCTCAGGTTTCTCAATCCCAAGGACCTTTGACGGGATCAACTCTTACTGCTACTGCTGCTGGAGGTACAATTGCTAGCAGCTTCTCTACATTCCCACCCAGTGGTGCTTCAGTAACATCTTTTGGATTGATGACATCATCGACTCTGAACAATGCAGGACAGTGGGCTAGTTTGCAGTATCAGCAACAGCAACCTTTGTTCGCTGCTGCCACTAGTCAGCCTTCTATTCAACAAGCTACACCACCAGTTGGTGGAGCTTTGAATAATCAGCCCTGGGTTGTACCTTCTGTACCATCGGTACAAGGGTATCCAAACACATCAATGCCCCATGTGTCACAGGTTGTCCCAAAGTCTGCCGTTGAGGCTAAATCCAGTGTTGTTTTACAATCGTCTATAGTAGACATGAAACCAAGTGGAAGAAGTGAACTTCCAGAGGATCTATTCACAGTTAAATATTCATCCTTCCCTGCTCCAGTCCCAGGTTGGCAAATGGGTCTACCGCCTAGCATGGGTATCTCAATTCCATACAATAATGCAGTGCCCATTTCAAGTTTTCCACAAGCATCAAAATCAAAAAATCCATTTGATGTTAATAACGAACGTACTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCTCTGCAAGGTGCTTTGGCAATACCTTCAGCAACAATGCACTCTTCAAACATGGGTAATCCATCTCTTGCCTGGAATCCGTCCTCATCATCATATGTATCAGTGCCGCCTCTTCAAGCACAAACTCTTGTACCCGAAATTCGACCAGGGGCATACATGGGACAACAAATGGCCACTAACATTCCAATGCCAAGGCATCAAGGATTTGGGAATTTTACTACTGAGGAAACTGCTTTTGGCTTCTCAAATCCAGATCAGAAGCTGAGTGGTAGTAGGTTGTCAACTGCTGTTACCCCAAACACCTTCCAGGCCGGAGGAAACCCTTTCGGATGA 2079 0.4411 MASRLKEDEKNERIIRGLLKLAPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVGSLQEGGNQRAKEIYFKEWDPQLHSFPDSSHVGRLRDFIKHVYVDRRFSGERTNDKPPRVKGDKDDFYENKRTETYQGGSKSPAYEDRFSDRSSPGGRSPGYDQENGQYGDYRISPSRPAIINDWHREERFGDGRKYEDQRISDGNHKGESHSPDSSSPPVVRPVREILGENVVPLRISEPPKTNSGQAVNGSTLTQRTSSSSTLASSHVTQTEVKPETIKSLIDFDDDPEPSVAPAISQAQQTAVAQLGMPVNSNDNNWASFDFAPEAKAPQGPSNVNPLESVLTQLTVPVYVPSQVSQSQGPLTGSTLTATAAGGTIASSFSTFPPSGASVTSFGLMTSSTLNNAGQWASLQYQQQQPLFAAATSQPSIQQATPPVGGALNNQPWVVPSVPSVQGYPNTSMPHVSQVVPKSAVEAKSSVVLQSSIVDMKPSGRSELPEDLFTVKYSSFPAPVPGWQMGLPPSMGISIPYNNAVPISSFPQASKSKNPFDVNNERTPVQAPTFPSMSSLQGALAIPSATMHSSNMGNPSLAWNPSSSSYVSVPPLQAQTLVPEIRPGAYMGQQMATNIPMPRHQGFGNFTTEETAFGFSNPDQKLSGSRLSTAVTPNTFQAGGNPFG* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04731 692 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Phac2g04731 692 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Phac2g04731 692 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Phac2g04731 692 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Phac2g04731 692 MobiDBLite consensus disorder prediction 124 290 - -
Phac2g04731 692 PANTHER ARFGAP/RECO-RELATED 1 692 IPR044820 GO:0005096
Phac2g04731 692 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Phac2g04731 692 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Phac2g04731 692 CDD ArfGap_AGFG 12 122 - -
Phac2g04731 692 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Phac2g04731 692 MobiDBLite consensus disorder prediction 253 290 - -
Phac2g04731 692 MobiDBLite consensus disorder prediction 124 146 - -
Phac2g04731 692 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Phac2g04731 692 MobiDBLite consensus disorder prediction 196 225 - -
Phac2g04731 692 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04731 Phac-Chr2 44218503 44234507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04731 12 122 C2H2 Transcription Factor Family AT4G21160 35.043 5.01e-13 68.9