Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04726 ATGAAGAAGAAAGAAGCAGACTCCTCCAATCTCACATTCCTCCTCGTTGCCTTGTTCTTGGTCACACTCTTCTTATGTGCCAATGGTTCCACTCTCGCGCTCACCCACCCACGCCACCTTCTCTCCTACAGGGACGAGTTTGGCGACAGAGGAGAGAATGTGAGTATAGACCCTTCCCTTGTTTTCCAAAATAACCGTCTCAGAGACGCTTACATTGCCTTGCAAGCTTGGAAGCTAGCCATTTTATCTGATCCCCAAAACCAGACAACCGACTGGGTAGGATCCCAAGTTTGTAGCTACACCGGAGTTTACTGTGCACCCGCCCTCGACAACCCCTCCATCCAAACAGTGGCCGGCATTGATCTCAACCATCGCGACATTGCTGGCTACTTACCGGAGGAGCTCGGTTTGCTCGTAGATCTTGCACTCTTCCACATCAACTCCAACAGATTCTGTGGCACCGTGCCCCACACCTTCCACAAGTTGATACTCCTCCACGAGCTGGATCTCAGTAACAACCGCTTCGCGGGGAGCTTCCCTGAGGTGGTTCTGCGCCTTCCTTCGCTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAAGGAACTGTGCCCAGGGAATTATTCGATAAAGATCTCGACGCCATTTTCATCAACGACAATCGTTTCGTCTTTGATCTTCCGGACAACTTCGGCAACTCCCCCGTCTCTGTCATCGTCCTCGCCAACAATAAGTTCCATGGCTGCATTCCGCACAGCCTTGGCAATATGTCCAACCTCAACGAGATCATTCTCATGAACAACGAATTCCGCTCCTGCTTGCCCTCCGAGATAGGCTTGTTGAAGAACCTCACGGTGTTCGACGTCAGCTTTAACCAACTTCTTGGTCCCTTACCCAAGGCCGTTGGAAACGCCGTCAGCTTGGAGCAGCTCAATGTGGCCCACAACTTACTCTCCGGTCAAATTCCTCCTAGTATTTGTATGTTGCCTCATCTCCTCAACTTCACTTACTCCTCTAACTTCTTCACCGGCGAACCTCCCGCCTGTCTCGCCTTGCCGGCGTTTGACGATAGGCTCAACTGCTTGCCGGCGAGGCCCGTTCAGAGGCCTCCGGCCCAATGTCAGGCTTTCTTGTCTAAGCCTGTCGATTGTAACTCCTTTAACTGCAAACCGTTTGTTCCTTCACCAACATCACCTGTAACTCCTTCGCCTCCATCACCTGGTACACCTTCACCTATAACTCCTTCGCCGTTACCTTCGCCTTCATCGCCACCTTCACCTGTAACTCCTTCACCCCCATCACCTGGGACACCTTCACCCGGAACTCCTTCACCTCCATCACCTGGGACTCCTTCGCCTCCATCACCTGGGACACCTTCACCTGTAACTCCTTCGCCTTCATCGCCTCCTTCACCTGCTACTCCTTCACCATTACCTTCACCCACAACACCTTCACCACTGCCTACACCTCCAGCTCCTGCAACACATCCTTCGCCACCGAACCCACTGGTACCTACACCTCCTTCGGAACCACCGGTGGTGGGACATTCCCCTCCACCAGGACCGGTGGCACCTTCCCCACTACCACCCGTTCATACTCCTCCTTCTCCAGTGTATTGGCCACCGCCACATTCTTCCCCTGCTCCACCTGTCTACTCTCCACAACCTCCAACACCTTCACATTTGCCGCCTCCGTCATATACTCCACCTTCTCCTTCTCCTTCTCCAATGCCACCTTCACCTACTCCAACGCCACCCTATGTTGCCCACCCTCCGCCGCCGCCAAGTTCGCCGTCGCCGCCGGCTCCAACATTCTCGACACCACCACCTTCACATGATTACGGCTCATCGCCACCTCCAACACCTCATAACTCACCCTCACCTCATGCATATCCTTATTTATCACCCCCACCACCTTCTCCTGTTCATCTTCCACCTCCACCACCTTGTACAGAACTTCCTCCACCCCCTCCTCAATCAACACCTTCTCCCACACCTTACCTTCCACCACCATCCCCATCTCACACACCTTATCACCCCCCACCATCCCCTTCTAACACTCCTTATCACCCATCACCATCCCATTCTCCCCCTCCACCTCCACCACTTCAATACAGTTCGCCGCCGCCGCCGGCATCGCCGCCACCCGTTTCTCCACCGCCACCTGTTGTGTACCAAAACCCACCACCTGCCCCTGTATATGAAGGGCCATTGCCACCCATCGTTGGACTCCCATACGCATCGCCTCCACCACCACCCTTTTATTGA 2265 0.5404 MKKKEADSSNLTFLLVALFLVTLFLCANGSTLALTHPRHLLSYRDEFGDRGENVSIDPSLVFQNNRLRDAYIALQAWKLAILSDPQNQTTDWVGSQVCSYTGVYCAPALDNPSIQTVAGIDLNHRDIAGYLPEELGLLVDLALFHINSNRFCGTVPHTFHKLILLHELDLSNNRFAGSFPEVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNKFHGCIPHSLGNMSNLNEIILMNNEFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPKAVGNAVSLEQLNVAHNLLSGQIPPSICMLPHLLNFTYSSNFFTGEPPACLALPAFDDRLNCLPARPVQRPPAQCQAFLSKPVDCNSFNCKPFVPSPTSPVTPSPPSPGTPSPITPSPLPSPSSPPSPVTPSPPSPGTPSPGTPSPPSPGTPSPPSPGTPSPVTPSPSSPPSPATPSPLPSPTTPSPLPTPPAPATHPSPPNPLVPTPPSEPPVVGHSPPPGPVAPSPLPPVHTPPSPVYWPPPHSSPAPPVYSPQPPTPSHLPPPSYTPPSPSPSPMPPSPTPTPPYVAHPPPPPSSPSPPAPTFSTPPPSHDYGSSPPPTPHNSPSPHAYPYLSPPPPSPVHLPPPPPCTELPPPPPQSTPSPTPYLPPPSPSHTPYHPPPSPSNTPYHPSPSHSPPPPPPLQYSSPPPPASPPPVSPPPPVVYQNPPPAPVYEGPLPPIVGLPYASPPPPPFY* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04726 754 MobiDBLite consensus disorder prediction 394 754 - -
Phac2g04726 754 SUPERFAMILY L domain-like 81 352 - -
Phac2g04726 754 FunFam Leucine-rich repeat extensin-like protein 1 71 232 - -
Phac2g04726 754 MobiDBLite consensus disorder prediction 392 754 - -
Phac2g04726 754 Pfam Leucine rich repeat 143 198 IPR001611 GO:0005515
Phac2g04726 754 Pfam Leucine rich repeat N-terminal domain 73 105 IPR013210 -
Phac2g04726 754 FunFam Leucine-rich repeat extensin-like protein 5 233 372 - -
Phac2g04726 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 524 - -
Phac2g04726 754 Gene3D Ribonuclease Inhibitor 69 236 IPR032675 -
Phac2g04726 754 Gene3D Ribonuclease Inhibitor 237 359 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04726 Phac-Chr2 44197862 44201661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04726 1 388 Trihelix Transcription Factor Family AT4G18670 70.574 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04726 - - vum:124830001 713.375