Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04710 ATGACTTCTCTCTCTGTCTTTCCCTCACTCCCATTGCTTCAAAACCCTAACTTCAGTAATCCCCGCCTCTCTAATTTCATCAATTTCCCTTTCAATTCCACGCGTTCTTTCGCACCACTCTCTCGCCGTGATTTCCTATGCAGAGCGTTCAGGGATTCCAGCGAGGACACCAAAGCGGTCCTCAAGTCCGACGACAGCGGCGGTGGAGACGGCGGCGGAGACGGTGGGGGTGACCGGGACGCGGAGAAAAAAGAAGGGCCTTTGCCGGAGTGGTTGAATTTCACTACCGATGACGCCAAAACGGTGCTTGCAGCTATCGCAATTTCCCTTGCGTTTCGCACCTTCGTGGCGGAGCCTAGGTACATTCCCTCGCTGTCAATGTACCCTACATTTGATGTTGGCGATCGAATTGTTGCTGAAAAGGTTTCTTACTATTTTAGAAAACCATGTGCAAGTGACATAGTGATATTTAAAAGCCCTCCAGTGCTTCAAGAAGTTGGATATAGTGACGACGATGTTTTTATAAAGCGTGTGGTTGCAAAGGGAGGTGATATTGTGGAGGTCCGTAAAGGGCATCTTGTAGTTAATGGGGTTGAGAGGAATGAAGACTACATTCTTGAACCACCTGCATATGAGATGAAACCCACACGAGTACCAGACAACTATGTGTTTGTGATGGGTGACAACCGGAATAACAGCTATGATTCCCATGTGTGGGGTCCCCTGCCATCGAAGAACATCATAGGAAGATCAGTATTTCGGTATTGGCCACCAAATAGAATTGCTGGCACAGTTTCTAAGGATAGTTGCAGTGTTGAAACCACGCCAGAGAGTACAGAGACTGCTCTACCTTCTCAATGA 861 0.4797 MTSLSVFPSLPLLQNPNFSNPRLSNFINFPFNSTRSFAPLSRRDFLCRAFRDSSEDTKAVLKSDDSGGGDGGGDGGGDRDAEKKEGPLPEWLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKGGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPDNYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIAGTVSKDSCSVETTPESTETALPSQ* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04710 286 Pfam Signal peptidase, peptidase S26 99 256 IPR019533 GO:0004252|GO:0006465
Phac2g04710 286 ProSitePatterns Signal peptidases I serine active site. 124 131 IPR019756 GO:0004252|GO:0016020
Phac2g04710 286 PRINTS Bacterial leader peptidase 1 (S26A) family signature 218 237 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac2g04710 286 PRINTS Bacterial leader peptidase 1 (S26A) family signature 115 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac2g04710 286 PRINTS Bacterial leader peptidase 1 (S26A) family signature 174 186 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac2g04710 286 NCBIfam signal peptidase I 100 258 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac2g04710 286 ProSitePatterns Signal peptidases I lysine active site. 176 188 IPR019757 GO:0008236|GO:0016020
Phac2g04710 286 MobiDBLite consensus disorder prediction 58 89 - -
Phac2g04710 286 ProSitePatterns Signal peptidases I signature 3. 223 236 IPR019758 GO:0004252|GO:0016020
Phac2g04710 286 PANTHER SIGNAL PEPTIDASE I 87 262 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac2g04710 286 CDD S26_SPase_I 118 250 IPR019533 GO:0004252|GO:0006465
Phac2g04710 286 FunFam Peptidase/ serine-type peptidase 124 255 - -
Phac2g04710 286 Gene3D Umud Fragment, subunit A 112 269 - -
Phac2g04710 286 SUPERFAMILY LexA/Signal peptidase 113 262 IPR036286 -
Phac2g04710 286 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04710 Phac-Chr2 44078996 44081821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04710 127 257 MADS-box Gene Family AT1G29960 31.061 4.51e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04710 K03100 - gmx:100815810 459.529