Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04686 ATGAATAGAGCTGTCTTGCAAAGCTCACCGGTGCAACAAATGATGGCTGCAAACCCTAACAACTGGTGGACCATTAACACCATGCGCCCTCCTCCTCCTCCTCCTTCTCAAGATTCTTCTCCTTTCTTCTCCACTCCTTCCAACTTTCTAACTCCACATAACCCCTCTTCTTCTCTTCCTCTTCCTTCTTGGCATGATAACAATCAAGAGCTACCAGAGTCATGGAGCCAGCTACTCATGAGTGGGATGGTGTCTGAAGAAGAGAAAGGGGCTATGTGCCAGGTTGAGTCTAAGAAGTTGGAGAACTGGGAGCAACAAATGCTGAGTCAGGCTTCAAGGGCTGCTATTGTTGATGTTAAACAAGAAGGGTCGGTGAACAGCTATGTGTACGGTCATGGAAACGAAGAGTTTCACCCACCAAAGCCAACTTGGTCTCAAATAGTGCCTGCTTCTTCACCCAAATCATGTGTAACAAGTTTCAGCAGCAGCATGTTGGATTTCTCTAACAATAACACAGATGCTAGGCCTCCTCCACTAGACCAATCATCAGAGTGTAATAGCAGTGCAGCTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACCGCCCACAACGCAGTCGACCTTCAAGGTTAGGAAGGAGAAATTAGGTGACAAAATTACAGCCCTTCATCAACTCGTTTCCCCGTTTGGAAAGACTGACACAGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACTGGATCAGGAAACATCAGGCACCAACAATCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAACTAGTGAGCAGGTTTCTGAAGAAGAGGCAAAGAAGGACCTAAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCTGATTATTGGGCACCAGCTTTTGGAGGAGGGTTTCGGTAG 1041 0.4659 MNRAVLQSSPVQQMMAANPNNWWTINTMRPPPPPPSQDSSPFFSTPSNFLTPHNPSSSLPLPSWHDNNQELPESWSQLLMSGMVSEEEKGAMCQVESKKLENWEQQMLSQASRAAIVDVKQEGSVNSYVYGHGNEEFHPPKPTWSQIVPASSPKSCVTSFSSSMLDFSNNNTDARPPPLDQSSECNSSAAGGAFKKARVQPPTTQSTFKVRKEKLGDKITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTGSGNIRHQQSVQGEKNCIFPEDPGQLLNENCLKRKATSEQVSEEEAKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGFR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04686 346 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 328 - -
Phac2g04686 346 MobiDBLite consensus disorder prediction 168 204 - -
Phac2g04686 346 MobiDBLite consensus disorder prediction 41 57 - -
Phac2g04686 346 MobiDBLite consensus disorder prediction 168 189 - -
Phac2g04686 346 Gene3D - 207 258 IPR036638 GO:0046983
Phac2g04686 346 MobiDBLite consensus disorder prediction 27 57 - -
Phac2g04686 346 CDD bHLH_AtbHLH_like 207 256 IPR045239 -
Phac2g04686 346 FunFam transcription factor bHLH68 isoform X1 206 259 - -
Phac2g04686 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 248 IPR011598 GO:0046983
Phac2g04686 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 259 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04686 Phac-Chr2 43985117 43989400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04686 1 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.961 7.46e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04686 - - gmx:100785156 598.586