Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04681 ATGTCTGAGGCATTGGAAGAGGTTCCTTCAATGAAAGGAGGGTGTGAAGAAGGGTTGAACCTGAAGGCCACCGAGCTGAGACTTGGGTTGCCTGGGTGTGAGTCCCCTGAGAGGGAGGGTGTGTTCAAGAGTGTGGTCGTGTCTGGGGCCAAGAGGGGTTTCTCTGATGCCATTGATGGAGGTTCTGGAAACTGGAATGGTGGATCTGAAATGGGTTTGGGGAAAGATGCTTCCTTGTTCTCTCCAAGGGGAACTGTTAGTGCTGCCAAGTCTCTCACTCTCACTGCAATAGACTGCACCAACCAACCAACTGCTTTGGGTGCTTCTGTTCTCAAGGAAACTGTTCCACACTCTCCAAAACCATTGCATGAGAAGAAGCCTCAGATTTCTGCTCCAGCTGCAAAGGCGCAAGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCTTCTCAGCCTCAGAAGAATGATGATGCTGAGGCAGAAGCCAAGTCTGAATGCCTTTATGTTAAAGTCAGCATGGAAGGTGCTCCATACTTGAGGAAAGTGGATCTTAATAGTTTTGGCACTTATAAGGAACTCTCTTTGGCACTTGAAAAGATGTTTAGTTGTTTTACAATCAAATATGTTCTTACCTATGAAGACAGAGATGGAGATTGGATGCTAGTTGGTGATGTTCCCTGGGAGATGTTCACTGAGTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCTCCTAGGGCCGTGGAAAAGTGCAAAAGTCGCAACTAG 795 0.4742 MSEALEEVPSMKGGCEEGLNLKATELRLGLPGCESPEREGVFKSVVVSGAKRGFSDAIDGGSGNWNGGSEMGLGKDASLFSPRGTVSAAKSLTLTAIDCTNQPTALGASVLKETVPHSPKPLHEKKPQISAPAAKAQVVGWPPIRSFRKNSMASQPQKNDDAEAEAKSECLYVKVSMEGAPYLRKVDLNSFGTYKELSLALEKMFSCFTIKYVLTYEDRDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAVEKCKSRN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04681 264 Gene3D - 164 258 - -
Phac2g04681 264 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 251 IPR003311 GO:0005634|GO:0006355
Phac2g04681 264 Pfam AUX/IAA family 211 255 IPR033389 -
Phac2g04681 264 Pfam AUX/IAA family 24 210 IPR033389 -
Phac2g04681 264 ProSiteProfiles PB1 domain profile. 170 246 IPR000270 GO:0005515
Phac2g04681 264 SUPERFAMILY CAD & PB1 domains 167 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04681 Phac-Chr2 43947078 43950730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04681 173 254 B3 DNA Binding Superfamily AT4G23980 36.782 2.02e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac2g04681 AUX_IAA 5.9e-40 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04681 K14484 - gmx:100778529 445.277