Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04680 ATGTCTGAGGCATTGGAAGAGGTTCCTTCAATGAAAGGAGGGTGTGAAGAAGGGTTGAACCTGAAGGCCACCGAGCTGAGACTTGGGTTGCCTGGGTGTGAGTCCCCTGAGAGGGAGGGTGTGTTCAAGAGTGTGGTCGTGTCTGGGGCCAAGAGGGGTTTCTCTGATGCCATTGATGGAGGTTCTGGAAACTGGAATGGTGGATCTGAAATGGGTTTGGGGAAAGATGCTTCCTTGTTCTCTCCAAGGGGAACTGTTAGTGCTGCCAAGTCTCTCACTCTCACTGCAATAGACTGCACCAACCAACCAACTGCTTTGGGTGCTTCTGTTCTCAAGGAAACTGTTCCACACTCTCCAAAACCATTGCATGAGAAGAAGCCTCAGATTTCTGCTCCAGCTGCAAAGGCGCAAGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCTTCTCAGCCTCAGAAGAATGATGATGCTGAGGCAGAAGCCAAGTCTGAATGCCTTTATGTTAAAGTCAGCATGGAAGGTGCTCCATACTTGAGGAAAGTGGATCTTAATAGTTTTGGCACTTATAAGGAACTCTCTTTGGCACTTGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGTGGCTCTTATGGGGTTTCTTCTGGTCGAGAAAATTTAAGTGAAAGTAGATTGATGGATCTTCTTCATGGTTCAGAATATGTTCTTACCTATGAAGACAGAGATGGAGATTGGATGCTAGTTGGTGATGTTCCCTGGGAGATGTTCACTGAGTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCTCCTAGGGCCGTGGAAAAGTGCAAAAGTCGCAACTAG 876 0.4669 MSEALEEVPSMKGGCEEGLNLKATELRLGLPGCESPEREGVFKSVVVSGAKRGFSDAIDGGSGNWNGGSEMGLGKDASLFSPRGTVSAAKSLTLTAIDCTNQPTALGASVLKETVPHSPKPLHEKKPQISAPAAKAQVVGWPPIRSFRKNSMASQPQKNDDAEAEAKSECLYVKVSMEGAPYLRKVDLNSFGTYKELSLALEKMFSCFTISQCGSYGVSSGRENLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAVEKCKSRN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04680 291 Pfam AUX/IAA family 24 282 IPR033389 -
Phac2g04680 291 SUPERFAMILY CAD & PB1 domains 167 272 - -
Phac2g04680 291 Gene3D - 164 285 - -
Phac2g04680 291 ProSiteProfiles PB1 domain profile. 170 273 IPR000270 GO:0005515
Phac2g04680 291 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 278 IPR003311 GO:0005634|GO:0006355
Phac2g04680 291 FunFam Auxin-responsive protein 165 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04680 Phac-Chr2 43947078 43950730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04680 173 281 B3 DNA Binding Superfamily AT4G23980 31.193 1.33e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Phac2g04680 AUX_IAA 3.4e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04680 K14484 - gmx:100778529 507.294