Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04659 ATGCACACAATCTCCCCTCACTCCAAGTTACTTTTCATTACCAACCAAACCATTCACTCACTCACACACTCACTCACTCACTCACACCAACAAGACTCAACGCTCGTAATGGCTGAGCAACCTAGCTCAGAAGCATCTTCATCTGCTTCCACCGGCAAGCACTCGTCATCGGAGGCCCATTTGGAAGGACCGGATCACAAAAGGCCCAAGCAGGCCCGAGATAGCAGTAGCAAGCACCCCGTATACAGAGGGGTACGAATGCGCTCCTGGGGGAAGTGGGTATCCGAAATCCGCGAGCCCAGGAAGAAGAACCGGATCTGGCTCGGCACCTTCGCCACCGCCGAGATGGCGGCGCGTGCGCACGACGTTGCGGCGCTCGCTATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAGCTCGCGGGCTCCCTGCCCCGGCCCGACTCCAACTCGCCGAGGGACGTTCAGGCGGCGGCGGCGAAGGCCGCCGCCATGGAGGTGATGGATCCCCCGACGACTCCATCGTGGACTCTGTCGCAGTGTTCGTCTTCGTCGTCGTTGGCGGGTAGTTCGTCCTCGGGCGAGGCGTCGACGGCGGAGGATCTGGGGGAGATAGTGGAGCTGCCGAGTCTGGGGACGAGTTTGGAAATACCGGAGCGGAGTGAGGAGGTGGTGTTTGTGGAGCCGGTGGACGGGTGGCTGTATTCTGAGGCGTGGTGTGACGGCATTTATGATGAAAGGGAGTGTGGGGGTTATTTCATTGGAGATGAGATTTCAATGCGGGAGTCAGAGAGCATGATTCTTTGTGGCTTTGAGGGTTCCTTGTGGCAGCATTAA 837 0.5842 MHTISPHSKLLFITNQTIHSLTHSLTHSHQQDSTLVMAEQPSSEASSSASTGKHSSSEAHLEGPDHKRPKQARDSSSKHPVYRGVRMRSWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAGSLPRPDSNSPRDVQAAAAKAAAMEVMDPPTTPSWTLSQCSSSSSLAGSSSSGEASTAEDLGEIVELPSLGTSLEIPERSEEVVFVEPVDGWLYSEAWCDGIYDERECGGYFIGDEISMRESESMILCGFEGSLWQH* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04659 278 MobiDBLite consensus disorder prediction 58 81 - -
Phac2g04659 278 MobiDBLite consensus disorder prediction 23 81 - -
Phac2g04659 278 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Phac2g04659 278 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Phac2g04659 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 56 214 - -
Phac2g04659 278 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Phac2g04659 278 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Phac2g04659 278 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Phac2g04659 278 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Phac2g04659 278 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Phac2g04659 278 MobiDBLite consensus disorder prediction 23 57 - -
Phac2g04659 278 Pfam AP2 domain 80 130 IPR001471 GO:0003700|GO:0006355
Phac2g04659 278 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04659 Phac-Chr2 43838909 43840771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04659 47 244 AP2-EREBP Transcription Factor Family AT5G25810 55.779 7.88e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g04659 AP2 8.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04659 K09286 - gmx:100778201 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04659 2 43838909 43840771 Phac2g04659 2 43838909 43840771 ECH