Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04617 ATGAATAAGATGAGCAACTTGAGTTGTGTTAGGAGCTCTGATCTCATAGATGCAAAGCTGGAAGAACATCAACTGTGTGGATCGAAACAGTGCCCTGGTTGTGGTCACAAATTTGAAGGGAAGCCGGACTGGCTAGGTCTTCCAGCAGGAGTGAAGTTTGATCCAACGGATCAAGAACTCATAGAACATCTTGAAGCCAAAGTTGAAGCAAAGAACATGAAATCACACCCATTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTGACAAGAGATGGCTTAAGCAGACACTTCTTCCACAGGCCCTCAAAGGCTTACACAACAGGGACACGAAAGAGGAGAAAGATTCAAAACGAATGCGACTTGCAAGGAGGGGAAACGCGATGGCACAAGACAGGTAAGACCAGACCAGTGATGGTGAATGGCACACAAAAGGGTTGCAAGAAGATTCTAGTGCTCTACACCAACTTCGGGAAGAACAGAAAACCTGAAAAGACAAACTGGGTGATGCACCAGTACCATCTGGGTCAGCACGAGGAAGAAAAGGAGGGAGAGCTTGTGGTGTCGAAGATATTCTACCAGACACAACCGAGGCAATGCAATTGGACAGATAGAAGTGCCACAACTGGTGAAGGAAGTGGAGAACAACAAGGCAACACTAGTGGAAGAAGAGACAGTGGAAGTGGGAGTTGTTCTTCTAAGGAAGTTGTCACTCACAGAGATGAAATGTCTGCTATCATTGGAGTCCCTCAAATAACACCCTTCAACACTGCCTTGGACATTCAACAACTCAAATCCGACCATTTTAGCTTCATTCCATTCAGAAAAAGCTTCGATGAGGTTGGAATAGGAGAAGCTTCCACAGGAAGAGAAGTGCAAGCATCAAGGTCGTGTGAGGAAGTACATGAACGGCATAATATTGTAGCACATCATCATCAACAACAGCAGCAGCAAAATCAGCATGCGCACCAACAAATTGCAACCACAGCCTTCCATATCAGTAGGCCTTCGCTTCCCATCTCCACCATCATCTCTCCTCCACCCCTTCACCATGCATCCATCATCCTAGATGACAACTCCTACCATGTCTCCACAATCATGCTTCAAAATGAAAATTTCCAGCAACAGCAGCAACACCATCATAAACTAGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGGTGCACCTCAACTGATATCAAAGAGGAGTCATCCATTACAAACCAACAAGAGGCTGAATGGTTGAAATACTCTTCTTTCTGGCCAGACCCTGGCAACCTGCACGATCATTCATGA 1347 0.4573 MNKMSNLSCVRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGTQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWTDRSATTGEGSGEQQGNTSGRRDSGSGSCSSKEVVTHRDEMSAIIGVPQITPFNTALDIQQLKSDHFSFIPFRKSFDEVGIGEASTGREVQASRSCEEVHERHNIVAHHHQQQQQQNQHAHQQIATTAFHISRPSLPISTIISPPPLHHASIILDDNSYHVSTIMLQNENFQQQQQHHHKLGGRSASGLEELIMGCTSTDIKEESSITNQQEAEWLKYSSFWPDPGNLHDHS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04617 448 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 12 338 IPR044799 GO:0003700
Phac2g04617 448 MobiDBLite consensus disorder prediction 216 248 - -
Phac2g04617 448 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Phac2g04617 448 MobiDBLite consensus disorder prediction 216 251 - -
Phac2g04617 448 FunFam NAC domain-containing protein 73 56 212 - -
Phac2g04617 448 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Phac2g04617 448 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Phac2g04617 448 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04617 Phac-Chr2 43578718 43584511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04617 4 438 NAC Transcription Factor Family AT5G56620 54.664 1.80e-139 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g04617 NAM 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04617 - - gmx:100794811 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04617 2 43578718 43584511 Phac2g04617 2 43578718 43584511 ECH