Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g04601 | ATGATGTTGGGGGAGACCCACCGCGCAAATCCAACCGTACACGTGCCACCGTGGCCGCTCCTCCACGAATCTTCACCGGAGATATTTTCGCCGTACGCTGCCAATGCCGATTACTCACCGTACTCTCTGCAAGAAGCGCTCAACGCGCTTCAGCACTACGACTCTACAGATGCCGAGTCAGACTCTGATGTTCCGTCTCTGGAACCGGAAGTCCCGGTTGACGCCTATTCCTGCGATCATTTCCGCATGTTCGAGTTCAAGGTTCGGAGATGCGCACGTGGCAGGTCACATGACTGGACCGAGTGTCCGTACGCCCACCCCGGCGAAAAGGCTCGCCGCCGTGATCCCCGCAAGTATCACTACTCCGGCACGGCGTGCCCCGATTTTCGCAAGGGGAGTTGCAAGAAGGGTGACGCATGCGAGTACGCGCATGGGGTTTTCGAGTGCTGGCTCCACCCGGCTCGTTACCGTACTCAACCGTGCAAGGATGGCACCAGTTGCCGCCGGCGGGTGTGTTTCTTTGCCCACACGCCCGAGCAACTGAGGGTTTTGCCGCAGCAGAGTCCACGCAGTGCGGACTCGTACGACGGGTCTCCTTTAAGACACGCGGTCGAGTCCTCCAAGACGGTGGCGCCCTTCGTGTCTTCTCCCGGGTCGGTGTCGCCGCCGGTGGAGTCTCCGCCTATGTCACCGATGACTCGTTCGGGTTCTGTGTGTGTTAACGAGATGGTTGCCTCGCTTAGAAACTTGCAAGTGGGGAAGGTTAAGTCGTTGCCTTCTTGCTGGAATGTTATAGGGTCTCCCGGGTTCGGATCACCCAGAGGACCCGTGATCCGACCCGGATTCTTCAGTCTCCCTTCGACCCCAACGCAGGCCCCTGTTCGCGGCGGGGTGAACTACTTTGACCACTGGGATCAGAGTTGCCAGGAAGAGCCTGTTATGGAGAGGGTGGAGTCTGGAAGAAACATAAGAGCGAGGATGTTTGAGAAGTTGAGCAAAGAGAATGTTCTTGACGGGTCGGGCTCGGGTGAGCCCGCTGCTCCGGATGTCGGGTGGGTGTCGGAGCTGGTGAGTCGCTGA | 1080 | 0.5889 | MMLGETHRANPTVHVPPWPLLHESSPEIFSPYAANADYSPYSLQEALNALQHYDSTDAESDSDVPSLEPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSPLRHAVESSKTVAPFVSSPGSVSPPVESPPMSPMTRSGSVCVNEMVASLRNLQVGKVKSLPSCWNVIGSPGFGSPRGPVIRPGFFSLPSTPTQAPVRGGVNYFDHWDQSCQEEPVMERVESGRNIRARMFEKLSKENVLDGSGSGEPAAPDVGWVSELVSR* | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g04601 | 359 | Gene3D | - | 121 | 184 | - | - | |
Phac2g04601 | 359 | PANTHER | UNKEMPT FAMILY MEMBER | 42 | 357 | IPR045234 | - | |
Phac2g04601 | 359 | SMART | c3hfinal6 | 155 | 178 | IPR000571 | GO:0046872 | |
Phac2g04601 | 359 | SMART | c3hfinal6 | 120 | 146 | IPR000571 | GO:0046872 | |
Phac2g04601 | 359 | FunFam | Zinc finger CCCH domain-containing protein 66 | 78 | 146 | - | - | |
Phac2g04601 | 359 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 125 | 145 | IPR000571 | GO:0046872 | |
Phac2g04601 | 359 | MobiDBLite | consensus disorder prediction | 206 | 233 | - | - | |
Phac2g04601 | 359 | MobiDBLite | consensus disorder prediction | 335 | 359 | - | - | |
Phac2g04601 | 359 | ProSiteProfiles | Zinc finger C3H1-type profile. | 121 | 147 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g04601 | Phac-Chr2 | 43486624 | 43489412 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g04601 | 65 | 184 | C2H2 Transcription Factor Family | AT5G12850 | 70.833 | 1.92e-58 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac2g04601 | zf-CCCH | 7.9e-06 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g04601 | - | - | gmx:100808676 | 635.18 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac2g04601 | 2 | 43486624 | 43489412 | Phac2g04601 | 2 | 43486624 | 43489412 | ECH |