Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04600 ATGTGTGTCAGTCAGACAAAGTCAAACTTTTCAAACCTTCCAACTTCCCAATCCCAATCCATTTTATATTATATACCACTTCTCCACTCTCCATATTCAGTGTTTTTCTTCACATTCAAATCTTCTGTCACTTCAGAGCCTTTTGCCTTGGCCATGGGAAGAGCTCCATGTTGTGACAAAGCTAACGTCAAAAGGGGTCCTTGGTCTCCCGAGGAAGATGAAACCCTCAAAAACTATCTCAAGAAACATGGCACTGGTGGCAATTGGATAACTCTCCCGCAAAAAGCAGGCCTTAAGCGGTGTGGGAAGAGTTGTCGTCTGAGATGGCTGAACTATCTCAGGCCTCATATCAAGCATGGAGGTTTCACGGAGGAGGAAGACCAAGTTATCTGCACCCTTTATTCCACTATCGGAAGCAGGTGGTCCCTTATTGCGGCTCAGTTACCTGGGAGAACAGACAACGATGTGAAAAACCACTGGAACACTAAGTTAAAGAAAAAGTTTTTGGTAGCAAACACCAATGCCACTGTCAAAACTGTTTCTCCACAGTTCACAGCTTCCACTACTCCTCTGTCTCAAGTTGAAGACTCTGTCTTTGATCATGATAACTCAGCTGAGTCCCATGTTTTGAGTTCGGAGCAGACACATATTCCAGTTCCTTCACCATTTCCTTTAGGATTTCATGTCTCAGGTCTAGGCAGCACTAATGAAGTTTCAGTTCTTTCAAACTCAACATCCTTGGTGAAACAGGAAAACCAGACTCAATGGTTCGGCTATCATGACAACATTGAAGGTGAAAATGAAGCACTTTTGCTTGATTTTGTGTATGAAGATCTCTTGCTTAGTAATGGGTTTGTTTCTCAAGAAAAAAGCAGCGAAATCGCCCCATCATTTGGCTAA 900 0.43 MCVSQTKSNFSNLPTSQSQSILYYIPLLHSPYSVFFFTFKSSVTSEPFALAMGRAPCCDKANVKRGPWSPEEDETLKNYLKKHGTGGNWITLPQKAGLKRCGKSCRLRWLNYLRPHIKHGGFTEEEDQVICTLYSTIGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLVANTNATVKTVSPQFTASTTPLSQVEDSVFDHDNSAESHVLSSEQTHIPVPSPFPLGFHVSGLGSTNEVSVLSNSTSLVKQENQTQWFGYHDNIEGENEALLLDFVYEDLLLSNGFVSQEKSSEIAPSFG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04600 299 Gene3D - 121 183 - -
Phac2g04600 299 FunFam Transcription factor RAX3 58 119 - -
Phac2g04600 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 113 IPR017930 -
Phac2g04600 299 ProSiteProfiles Myb-like domain profile. 60 113 IPR001005 -
Phac2g04600 299 Pfam Myb-like DNA-binding domain 120 162 IPR001005 -
Phac2g04600 299 Pfam Myb-like DNA-binding domain 65 113 IPR001005 -
Phac2g04600 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 168 IPR017930 -
Phac2g04600 299 SUPERFAMILY Homeodomain-like 62 160 IPR009057 -
Phac2g04600 299 ProSiteProfiles Myb-like domain profile. 114 164 IPR001005 -
Phac2g04600 299 PANTHER OS09G0431300 PROTEIN 52 233 - -
Phac2g04600 299 CDD SANT 122 164 IPR001005 -
Phac2g04600 299 Gene3D - 58 119 - -
Phac2g04600 299 CDD SANT 67 113 IPR001005 -
Phac2g04600 299 SMART sant 64 115 IPR001005 -
Phac2g04600 299 SMART sant 118 166 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04600 Phac-Chr2 43478670 43480422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04600 52 169 MYB Transcription Factor Family AT5G57620 82.203 1.80e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g04600 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04600 K09422 - gmx:778160 304.679