Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04572 ATGGGGAGAAAGTGCTCACATTGTGGAGTGATAGGGCACAATTCAAGGACCTGCACTTCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGCCTCTTTGGCGTGCAATTAGACACCTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCTTTTTCTTCATCAAGAATAACCATTGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGATGGTCTCATAGCTCCAGTTCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTAGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCTAGAAACTTTGTGACCACAAGAACCCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCAAGTCTCTTTGACGTGGTTGGTAGCAACAGCCCCAGCATAGGAGTTTCGTCTAAATGTGAAGTTAAGAATAACGATGCCACTTTGTCCTTGCTAACCTACTTTCAACAAGAAACCAAATCAGATTATAATAAGCAAGAAAATCTTGATAATTCCCCTCATCAACTTCCTAATCTCGACCTTACTCTCCGTTCCTGCTTGAGCCAATTACTGTGA 669 0.4335 MGRKCSHCGVIGHNSRTCTSLRGSSFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRITIDENSDRTSFGYLSDGLIAPVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDVVGSNSPSIGVSSKCEVKNNDATLSLLTYFQQETKSDYNKQENLDNSPHQLPNLDLTLRSCLSQLL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04572 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Phac2g04572 222 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Phac2g04572 222 FunFam transcription factor MYB1R1 93 144 - -
Phac2g04572 222 SMART sant 91 141 IPR001005 -
Phac2g04572 222 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Phac2g04572 222 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Phac2g04572 222 CDD SANT 94 139 IPR001005 -
Phac2g04572 222 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Phac2g04572 222 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Phac2g04572 222 Gene3D - 93 145 - -
Phac2g04572 222 PANTHER TRANSCRIPTION FACTOR KUA1 3 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04572 Phac-Chr2 43339367 43341021 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac2g04572 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04572 - - gmx:778093 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04572 2 43339367 43341021 Phac2g04572 2 43339367 43341021 ECH