LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g04544	ATGTCAAGGTTGATTCAGGAGAAGAAAATAGGTGCAGGACGTGTGGTGGCAGTGGCAATTGAAAACAACAAAACAAGCCAATATGCAGCAAAATGGGCAGTGGACAATCTTCTTCCCAAAGAACAAGCGCTCTTATTGATCCATGTTAGACAGAGAGCATCTTCCATTCCTACACCAACGGGAAACCTTGTACCCCTTGATGGCAACGATGATGTGGCTAGGGCATACACGCAACAAATGGACAATGAATCTAAAGAACTTTTCGCATCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAGGTGATACTGGAGGACATGGATATAGCTAAGGGATTAATAGAAGGTATTTCTAAGTATTCCATCGAGCTTCTGGTACTCGGGGCACCTTCAAGGAGTGGTCTTGTTAGAAGATTTAGGACATCGGATATTCCAAGTCTTGTGTCCAAAGGGGCACCACCATTCTGTACTGTGTACATCATTTCTAAAGGAAAAATCTCACAGGTGAAAACAGCTACTGCTAAACCTCCAGCTCGTAACAATACACTGCAGCCGCAGCAGTCTAATGGGAGAATGGATCCACAACTAACACGCAATCCTGCCCTGACACGACCATCAATGGAGAAGTCAGCATACCTTGTCCGCCAGCAACCAGCAGATGAAGAGGAAATGATATCACCATTCACAAGACCTGGTAGAGGAGGAAGTTACAGATCATACGAGTCCTCAGTCGTTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCTAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATATGGACTCCGGCATGAATCCTCGGCTTTCAACAGGCTCAGATTTTGACAACAGAAGCTATGGCTCTTCATTCTCAGGAGCCAAATCAATTGATCATGGTGACTTCTCATTCAGTTCACAAGACAGTGGGATATCAATGTCATCGTCGATGTTTTCAGCTCAAGATGAAGTGGAAGCTGAAATGAGGAGATTGAAGCTAGAACTGAAGCAGACAATGGAACTGTACAGTACTGCATGCAAGGAAGCTATGACGGCTAAGCAAAAGGCACTAGAATTACAGCGTTGGAAAGTGGAAGAAGAAAGGAAAATGGAAGAGGAACGATTAGCTGAAGAAACAGCATTGGCAAGGGCTGAGAAGGAGAAAGCAAAATCTATAGTTGCCATGGAAGCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACTAAAGAGAATGAGTGTAGGATCTGGTTATAAGACTGCAGATATATTTTCACACAGTCCTGCCAGGTACAGAAAATACACTATAGAGGAGATAGAAGAAGCAACAAATTTCTTTTCCAACTCTCTCAAGGTCGGTGAAGGTGGTTATGGGCCAGTCTACAGGTGTGAACTAGATCACACGCCAGTTGCAGTGAAGGTATTGAAACCAGGTGCAGCTCAGGGACAGTTACAGTTTCAGCAGGAGGTTGAAGTGCTGAGTAGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCGTGCCCAGAGTTTGGGTGCTTGGTGTATGAGTATATGGCTAATGGAAGTTTAGACGATTGCCTCTTCCGGAGAGGCAACAAAAGAGCTCTTCCCTGGCAGCTGAGATTCCGAATTGCTGCAGAGATTGCAACTGGGCTCCTTTTCCTACACCAGACAAAGCCAGAACCACTAGTGCACCGTGACTTGAAACCTGGGAACATTTTGCTTGACCGTAACTTCGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTTCCGCCTTCAGTTGAAGACGCCGTCACACAGTATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTGGGAACCAAATCTGATATTTACTCACTGGGGATCATGCTTCTACAGATAATAACAGCAAAGCCACCAATGGGTTTGACTCACCTTGTTGAAAGAGCTATTGAGAAGGGAACTTTTGCGGACATGCTTGACCCAGCCGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTTGCCAAACTTTGCTTGTGGTGTGCAGAAATGAAAAGAAAAGATAGACCTGATCTTGGAAAGGTTGTATTGCCCGAGCTCAATAAACTCAGAGATTTTGCTGACGATAACATGCCCATGATGATGATGTTCGGTGTTCCCTCAGGATTCGGTACCAGAAGCAGCTACAGTTACTCAAACTCCTCCAATTCCTCACCTCAAAACTCCATGAGTGAAGAGTCAACATCAGGAATGTCTGGATACGAAACCCGCTCGAGCTCATCGTATGCATAA	2337	0.451	MSRLIQEKKIGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQALLLIHVRQRASSIPTPTGNLVPLDGNDDVARAYTQQMDNESKELFASFRVFCNRKSIQCKEVILEDMDIAKGLIEGISKYSIELLVLGAPSRSGLVRRFRTSDIPSLVSKGAPPFCTVYIISKGKISQVKTATAKPPARNNTLQPQQSNGRMDPQLTRNPALTRPSMEKSAYLVRQQPADEEEMISPFTRPGRGGSYRSYESSVVDSDISFVSSGRPSVDRMFPSMYDDMDSGMNPRLSTGSDFDNRSYGSSFSGAKSIDHGDFSFSSQDSGISMSSSMFSAQDEVEAEMRRLKLELKQTMELYSTACKEAMTAKQKALELQRWKVEEERKMEEERLAEETALARAEKEKAKSIVAMEAAETSRKIAELEALKRMSVGSGYKTADIFSHSPARYRKYTIEEIEEATNFFSNSLKVGEGGYGPVYRCELDHTPVAVKVLKPGAAQGQLQFQQEVEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKRALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVEDAVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQIITAKPPMGLTHLVERAIEKGTFADMLDPAVEDWPVEHALHFAKLCLWCAEMKRKDRPDLGKVVLPELNKLRDFADDNMPMMMMFGVPSGFGTRSSYSYSNSSNSSPQNSMSEESTSGMSGYETRSSSSYA*	779

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g04544	778	MobiDBLite	consensus disorder prediction	743	778	-	-
	Phac2g04544	778	SMART	serkin_6	452	722	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g04544	778	CDD	STK_N	15	167	-	-
	Phac2g04544	778	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	425	524	-	-
	Phac2g04544	778	Gene3D	HUPs	14	160	IPR014729	-
	Phac2g04544	778	Pfam	Protein kinase domain	455	707	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g04544	778	Gene3D	Transferase(Phosphotransferase) domain 1	525	729	-	-
	Phac2g04544	778	Coils	Coil	326	346	-	-
	Phac2g04544	778	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	570	582	IPR008271	GO:0004672\|GO:0006468
	Phac2g04544	778	MobiDBLite	consensus disorder prediction	174	204	-	-
	Phac2g04544	778	ProSiteProfiles	Protein kinase domain profile.	452	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g04544	778	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	151	-	-
	Phac2g04544	778	SUPERFAMILY	Protein kinase-like (PK-like)	431	711	IPR011009	-
	Phac2g04544	778	PANTHER	OS02G0152300 PROTEIN	15	739	-	-
	Phac2g04544	778	Gene3D	Phosphorylase Kinase; domain 1	431	524	-	-
	Phac2g04544	778	FunFam	U-box domain-containing protein 51	525	725	-	-
	Phac2g04544	778	Pfam	Universal stress protein family	14	145	IPR006016	-
	Phac2g04544	778	Coils	Coil	372	392	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g04544	Phac-Chr2	43153994	43158640	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g04544	16	745	Receptor kinase-like Gene Family	AT5G35380	57.240	0.0	740

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Phac2g04544		Pkinase	3.5e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g04544	-		-	gmx:100803837	1233.78