Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04543 ATGGCACTAAGTGGTAGGCATTACTGGATCATCTTCATCCTTTTTCAAGCACCCCTTCTTCTCTATTCTGCCGCTTCGGACTTTGAATTGCTCCTCAAACTCAAAGATAGCTTGGAAAACTACGGTTCCTCCTTGGACTCATGGAACTCTACCACTCCTCCTTGCAACGTTGGCCATGCCAACTGGCATGGCATTCTTTGCTACGAAGGAAAAGTGTGGGGCGTGAAGCTTGAGAACATGGGGCTCAAAGGGGTCATTGACATAGAATCTCTAAAAGAATTGCCTTACCTAAGAACCTTGAGTTTCATGAACAATAATTTGGAGGGTTCATGGCCCGAAATTCACCTCTTGGTTGGTCTCAAGTCTATTTACCTTTCGAATAACAAGTTTTCTGGGGAGATTCCTTATAGAGCCTTCGAGGGGTTGAAGTGGTTGAAGAAAATTCATCTGTCGAACAACCAATTCTCGGGTTTTATTCCAACTTCGGTGACGCAGTTGCCGAGACTCATAGAGCTGAGGTTGGATGGGAATGAATTCACTGGCCCCATTCCCCATTTTCATCACCTCAACAGATTGAGATCGTTTAATGTTGCTAATAATGAGTTGCAGGGTCAGATTCCTCACACCATTAGTAGAATGCCGGTTTCTTCCTTTGCTGGTAATGAAAGGTTATGTGGAGCCCCATTGGAGTCATGCACTGCGAAGCCCTCCACTGCGAGCATCATTGTGGCAGTGGTGGTTGTTGGCCTGGCAGTGCTTGTGATTGGAGCAGTAGGCTTCATCATTCACAGAAGAAAGAAACGAGAGTCTGAAATGAGCTTGGGCAATCCATCCAGTGGCCTTGGCAAAGGGCGTCTGAGGGGTGGGGGTGATGAGAACCACTTGTCCTCAAGGTCAATGGGCTCCTCAAGCAGAAGAGGTGATCCCATGAGACTCTCTTTTCTGAGAGATGACAGAGAAAGGTTTGACCTTCAAGAGTTGCTGAAAGCCTCTGCTGAGATTTTGGGAAGTGGCTGCTTCAGCTCTTCGTACAAGGCTGCTTTGATAAATGGGCCAACAATAGTGGTGAAGAGGTTCAAGCAGATGAACAATGTGGGGAAGGAAGAGTTCCAAGAGCACATGAGAAGGCTAGGGAGTTTGAATCATCCTAACTTGCTTCCTCCAGTGGCTTACTATTACAGAAAGGAAGAGAAGCTTGTGGTCACAGACTATGTTCACAATGGCAGTCTCGCTGTTCGCCTTCATGGGCACCAATCCCTGGGAGAACCAAGCCTTGAGTGGCCAGTCCGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAGGGACATGCCAAGCCTAATTGCCCCACATGGAAATCTCAAGTCCTCTAATGTTCTCTTGACTGAATCTTTTGAGCCTCTCCTCACAGACTATGGCCTAGTCCCAGTGATAAACCAGGAATTGGCTCAGGACATCATGGTGATATACAAGAGTCCTGAGTATTTGCAACATGGAAGGATTACAAAGAAGAGTGATGTGTGGTGTCTTGGAATACTGATTCTGGAGATCCTAACAGGGAAGTTCCCTGCAAACTTTTTGCAAAAGGGTAAAGGAAGTGAGGTGAGTTTGGCCAGTTGGGTGGATTCAGTTGTGCCAGAAGAGTGGACCAATGCTGTGTTTGATCAAGATATGGGGGAAACAAAGAACAGTGAAGGAGAGATGGGGAAGCTTTTGAAGATTGCCTTGAACTGTTGTGAGGCTGATGTGGATAAGAGGTGGGATATAAAAGAATCAGTAGTGAAAATCCTTGAGGTGAAGCAAAGGGATGATGATCAAGACAATTTTTTTGAAACATACATTTGA 1857 0.4577 MALSGRHYWIIFILFQAPLLLYSAASDFELLLKLKDSLENYGSSLDSWNSTTPPCNVGHANWHGILCYEGKVWGVKLENMGLKGVIDIESLKELPYLRTLSFMNNNLEGSWPEIHLLVGLKSIYLSNNKFSGEIPYRAFEGLKWLKKIHLSNNQFSGFIPTSVTQLPRLIELRLDGNEFTGPIPHFHHLNRLRSFNVANNELQGQIPHTISRMPVSSFAGNERLCGAPLESCTAKPSTASIIVAVVVVGLAVLVIGAVGFIIHRRKKRESEMSLGNPSSGLGKGRLRGGGDENHLSSRSMGSSSRRGDPMRLSFLRDDRERFDLQELLKASAEILGSGCFSSSYKAALINGPTIVVKRFKQMNNVGKEEFQEHMRRLGSLNHPNLLPPVAYYYRKEEKLVVTDYVHNGSLAVRLHGHQSLGEPSLEWPVRLKIVKGIAKGLEYLYRDMPSLIAPHGNLKSSNVLLTESFEPLLTDYGLVPVINQELAQDIMVIYKSPEYLQHGRITKKSDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVDSVVPEEWTNAVFDQDMGETKNSEGEMGKLLKIALNCCEADVDKRWDIKESVVKILEVKQRDDDQDNFFETYI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04543 618 ProSiteProfiles Protein kinase domain profile. 329 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04543 618 SUPERFAMILY L domain-like 26 213 - -
Phac2g04543 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 608 IPR046959 -
Phac2g04543 618 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
Phac2g04543 618 MobiDBLite consensus disorder prediction 269 310 - -
Phac2g04543 618 Gene3D Phosphorylase Kinase; domain 1 296 404 - -
Phac2g04543 618 Pfam Protein tyrosine and serine/threonine kinase 333 596 IPR001245 GO:0004672|GO:0006468
Phac2g04543 618 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Phac2g04543 618 FunFam pollen receptor-like kinase 1 298 404 - -
Phac2g04543 618 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Phac2g04543 618 Gene3D Ribonuclease Inhibitor 187 232 IPR032675 -
Phac2g04543 618 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Phac2g04543 618 FunFam Pollen receptor-like kinase 1 405 614 - -
Phac2g04543 618 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Phac2g04543 618 FunFam Nuclear pore complex protein NUP107 24 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04543 Phac-Chr2 43147791 43151304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04543 11 618 Receptor kinase-like Gene Family AT5G35390 53.052 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac2g04543 PK_Tyr_Ser-Thr 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04543 - - gmx:100804368 943.34