Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04474 ATGGAGAGTGAATGGAGCTGGGAGCAGAACACACTCGTCAACGAGTTAATTCAAGGGATGGAGCTAGCAAGGAAGTTGAAGGAAGACTTGAGGATGCCGTATTCAGTTGACTCAAGAGATATGCTGGTGCAGAGGATAGTATCTTCTTATGAAAAGGCTCTACTCATTCTAAGGTGCAATGCACCAACTTCCGAGTTGCAGGCCACGAGTCAAGCGACTGCAACTTTGTTACCAGAGTCCCCAATATCTGTCCATGGAAGTCCTCTGAGTGAGGATGTTGATGGGGCCATCAAGGATCACAAAGAAATTCAACATGATGCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCATGTAAGAGTGAGCTGTGATAGTGGCCTTGAAGGGCCACAAGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGACATCCTCGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGGCTGTTGGGCCACGAAGCAAGTGCAGAGATCAGATGAAGACCCCACAATATTTGACATAACCTACAGAGGAAAGCATACCTGTTCTCAAGGAAACAACGCTGTTTTGCCACCTAAGTCACCAGACAAACAAGAGAAGACACACATTCATCATGCACAGGCATCACAAGAAAGCCTTCCGAAGTTCAGAAACAACATGTCTGTCAACACAGAAAAACTAGACAATGGAGATACGGCATATCCTTTCACTTTCCCTTCGACTTCAATGAAAGAATACAACCACAGCTTTATTCCTTTGACCCTTGAGAATGAGTACTTCTTGAGCGACCAATACCAAACGTACCTGTTATCTCCAACAACACCAGAATCGAACTATTTACCATCTCCAACTTTCCAGATTAATGAGTTTGATGGAATCTACAACAAGCCTTATTCGGAATCAGATATTAACGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCAGCGGAAATTGACCCGAATTTCCCTTTCAACACCCCAGGATTTTTCTCCTGA 1062 0.4369 MESEWSWEQNTLVNELIQGMELARKLKEDLRMPYSVDSRDMLVQRIVSSYEKALLILRCNAPTSELQATSQATATLLPESPISVHGSPLSEDVDGAIKDHKEIQHDAKKRKITPKWMDHVRVSCDSGLEGPQEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAVLPPKSPDKQEKTHIHHAQASQESLPKFRNNMSVNTEKLDNGDTAYPFTFPSTSMKEYNHSFIPLTLENEYFLSDQYQTYLLSPTTPESNYLPSPTFQINEFDGIYNKPYSESDINEIISTNTSATNSPIPDFNFSLDPAEIDPNFPFNTPGFFS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04474 353 FunFam WRKY transcription factor 53 118 195 - -
Phac2g04474 353 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g04474 353 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g04474 353 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g04474 353 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g04474 353 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g04474 353 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 261 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04474 Phac-Chr2 42641855 42643140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04474 6 251 WRKY Transcription Factor Family AT4G23810 45.387 7.06e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g04474 WRKY 8.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04474 - - gmx:100815760 619.772