Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04470 ATGGGTGACACAGTTGTTGAGGTAGCCAAAAAGAGGGGAAGGGGCAGAAAGGCCCTGAAGGAGAAAACCCCATCAACGAACGAGGCCAACATCATCGCCGGGAAGGTTTCTGAGTCCTCAACGACACCAATTTCTCCGTCGTCGAAACAAGATTCCAAGAAGCAGCAATCTTTCGAGAAAGAATTGCTGGAGATGCAGGAAATGCTGCAGCAGATGCGTCTCGAGAAGGAGAAAACCGAAGAGCTCTTGAAGGCCAGAGACGAGGCCCTCAAGCAGAAGGACGAAGAGCTCGAAAACCGTGGCCGTGAACAAGAGAAGCTTCAAGTTGAGCTGAAAAAACTGCAGAAGTTGAAGGAGTTTAAACCTACCATGAATTTGCCTGTGATGAAAGATAATGAGACAAAAAAGGACAAGAAGAAGAAGGGGGGCTCTGAGAAGAAAAGGCCTTCTCCACCTTACATTTTGTGGATGAAAGACCAATGGAATGAGATCAAGAAAACGAACCCAGAGGCAGAATTTAAGGAAACTTCTAACATGTTGGGGGCTAAATGGAAGACTGTCAGTGCAGAGGAGAAGAAGCCTTATGAAGAGAAATATCATACTGAGAAAGAAGCTTATTTGCAAGTGATTGCAAAGGAAAAACGTGAGAGTGAGGCAATGAGGTTGTTTGACGAGGAGCAGAAACACAGGACTGCCATGGAATTGCTTGAACAGTACATGCAATTCAAACAAGAGGCTGAAAAAGAGACCAAGAAGAACAAGAAAGAGAAGGATCCATTGAAACCAAAGCACCCCATGTCTGCTTATTTCTTGTTCACTAACGATAGGCGAGCAGCTCTTCTTGCTGAGAACAAGAATTTCTTGGAGATTCCAAAGATCACAGCCGAAGAGTGGAAAAGCATGACAGAGAAACAAAGGAGACCCTATGAAGAGATGGCAAAGAAGAACAAGGAGAAATATGCTTTAGAAATGGAGGCTTACAAGCAGAAGAAAGATGAGGAAGCTGCCCACATCATGAAGGAGGAGGAGGAGCATATGAAACTTCAGAAACAAGAAGCCATGCAAATGCTGAAGAAGAAGGAGAAAACTGATAATCTAATCAAGAAAACAAAACAGAATCGTCAGAAGAAGAAACAAAACAAGGAAGACAAGAATTCTGATCCAAACAGACCTAAGAGGCCTCCATCATCGTACATCGTATTCTGCAAAGAAGCAAGGAAAACTTTACAGGAGGAAAGACCAGGACTCAACACCTCAACCCTTAATGCACTTGTCTCGTTGAAGTGGAAGGAACTGAGTGAGGAAGAGAGGCAAGTCTGGAATAACCAAGCATCTGATGCAATGGAGGCGTACAAGAAGGAAATGGAGGAATACAACAAGTCTCTTTCTGCAATTGCAAACCTGGAAACCGAACAGTAA 1419 0.439 MGDTVVEVAKKRGRGRKALKEKTPSTNEANIIAGKVSESSTTPISPSSKQDSKKQQSFEKELLEMQEMLQQMRLEKEKTEELLKARDEALKQKDEELENRGREQEKLQVELKKLQKLKEFKPTMNLPVMKDNETKKDKKKKGGSEKKRPSPPYILWMKDQWNEIKKTNPEAEFKETSNMLGAKWKTVSAEEKKPYEEKYHTEKEAYLQVIAKEKRESEAMRLFDEEQKHRTAMELLEQYMQFKQEAEKETKKNKKEKDPLKPKHPMSAYFLFTNDRRAALLAENKNFLEIPKITAEEWKSMTEKQRRPYEEMAKKNKEKYALEMEAYKQKKDEEAAHIMKEEEEHMKLQKQEAMQMLKKKEKTDNLIKKTKQNRQKKKQNKEDKNSDPNRPKRPPSSYIVFCKEARKTLQEERPGLNTSTLNALVSLKWKELSEEERQVWNNQASDAMEAYKKEMEEYNKSLSAIANLETEQ* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04470 472 MobiDBLite consensus disorder prediction 85 106 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 331 399 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 242 263 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 1 59 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 130 147 - -
Phac2g04470 472 SMART hmgende2 390 460 IPR009071 -
Phac2g04470 472 SMART hmgende2 145 215 IPR009071 -
Phac2g04470 472 SMART hmgende2 261 329 IPR009071 -
Phac2g04470 472 Coils Coil 232 252 - -
Phac2g04470 472 SUPERFAMILY HMG-box 249 335 IPR036910 -
Phac2g04470 472 Coils Coil 310 387 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 331 390 - -
Phac2g04470 472 MobiDBLite consensus disorder prediction 1 23 - -
Phac2g04470 472 SUPERFAMILY HMG-box 386 463 IPR036910 -
Phac2g04470 472 Pfam HMG (high mobility group) box 262 328 IPR009071 -
Phac2g04470 472 Pfam HMG (high mobility group) box 391 459 IPR009071 -
Phac2g04470 472 Pfam HMG (high mobility group) box 147 208 IPR009071 -
Phac2g04470 472 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 391 459 IPR009071 -
Phac2g04470 472 Gene3D High mobility group box domain 131 212 IPR036910 -
Phac2g04470 472 MobiDBLite consensus disorder prediction 24 52 - -
Phac2g04470 472 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 262 328 IPR009071 -
Phac2g04470 472 SUPERFAMILY HMG-box 133 209 IPR036910 -
Phac2g04470 472 MobiDBLite consensus disorder prediction 121 152 - -
Phac2g04470 472 CDD HMG-box_AtHMGB6-like_rpt1 148 214 - -
Phac2g04470 472 Coils Coil 55 117 - -
Phac2g04470 472 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 146 214 IPR009071 -
Phac2g04470 472 Coils Coil 441 471 - -
Phac2g04470 472 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 6 465 IPR044601 GO:0003677
Phac2g04470 472 Gene3D High mobility group box domain 369 468 IPR036910 -
Phac2g04470 472 Gene3D High mobility group box domain 245 342 IPR036910 -
Phac2g04470 472 MobiDBLite consensus disorder prediction 242 265 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Phac2g04470 HMG_box 1.3e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04470 K09273 - gmx:100783033 665.225