Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04455 ATGGCTTCATCTACCATCAAGCAAACAGAACACCTCAACCGCACCAAACTCCTCCTAGAAGAAGACACCCTTTTGAAGAACCATCACCATCCCAAACTCGTGCGAATACGCGTCACCGACGCCGACGCCACGGACTCCTCCAGCGACGAGGACCAGCCTTCCGTGTCCTCCACACGCCGCCGAGTCAAAAGCTTCGTCAACGAGATTACCATCCACGGCGCCGGCGTTAAAGTTGTTTCCAGGAAAAGAAAGGTGAAGTCTGCCAACGCTCAGGCGCTCCGGCGGCGGACGGAGGCGAGGAAGTTCCGCGGAGTGAGGCAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATTAGGGACCCGTCGCGACGCGTTCGGCTGTGGCTGGGCACCTACGACACTGCCGAGGAAGCCGCCATTGTGTACGACAACGCGGCCATTCAGCTGCGTGGCGCCGACGCGCTCACTAATTTCATAACGCCGCCGGCGGAGGGCATAAAAAGCGGTTACTGCTCCGGCGAGGAGGAGTTGCGCTCCCCCACTTCGGTTCTTCGGTGCTGTTGGGCGTCGGAGGAAGTTGAATCGGTAACAGCAAACGACGTGGTTGGTCCCGCGAGCGAGTGCGAACACTCATGCGTTTCGGAGGATAGTAAGTCGAAAGATGAGACAGTGTTTGGTATTCCTGATGATGTGGCATTCGGTTTTGAGAGCACGTTGGGTATGTTTGACGAGTGCGTTAACAACGTTGCACAGAGCAGTGGTATATTCTTGGACGATGAATTTGATTTAAGTGGATGTTTTGTTAGTGAAAAAGAGAATTTAGATTTGGGTTTTGGTTTTGGGTCTACGAGTTGGCAAAGAGAGTGCGATAATTTCCAAGACATTGGGGATTTGTTTGTTTGGGATCCTCTTGTCGCTCTTTGA 921 0.544 MASSTIKQTEHLNRTKLLLEEDTLLKNHHHPKLVRIRVTDADATDSSSDEDQPSVSSTRRRVKSFVNEITIHGAGVKVVSRKRKVKSANAQALRRRTEARKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAIVYDNAAIQLRGADALTNFITPPAEGIKSGYCSGEEELRSPTSVLRCCWASEEVESVTANDVVGPASECEHSCVSEDSKSKDETVFGIPDDVAFGFESTLGMFDECVNNVAQSSGIFLDDEFDLSGCFVSEKENLDLGFGFGSTSWQRECDNFQDIGDLFVWDPLVAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04455 306 MobiDBLite consensus disorder prediction 36 59 - -
Phac2g04455 306 CDD AP2 101 157 IPR001471 GO:0003700|GO:0006355
Phac2g04455 306 SUPERFAMILY DNA-binding domain 101 157 IPR016177 GO:0003677
Phac2g04455 306 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 189 - -
Phac2g04455 306 Pfam AP2 domain 101 150 IPR001471 GO:0003700|GO:0006355
Phac2g04455 306 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Phac2g04455 306 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Phac2g04455 306 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Phac2g04455 306 FunFam Ethylene-responsive transcription factor 2 100 159 - -
Phac2g04455 306 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
Phac2g04455 306 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04455 Phac-Chr2 42538457 42540107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04455 1 306 AP2-EREBP Transcription Factor Family AT4G23750 39.718 8.00e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g04455 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04455 - - gmx:100813992 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04455 2 42538457 42540107 Phac2g04455 2 42538457 42540107 ECH
Phac2g04455 2 42538457 42540107 Phac2g00359 2 1796014 1798114 PCT