Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04446 ATGGAGTCCGCAGCTTTGTCGCGCATAGGTCTGGCGGGCCTGGCCGTGATGGGCCAGAACCTAGCCCTAAACATTGCGGAGAAGGGATTCCCCATCTCCGTCTACAACCGTACGGCCTCCAAAGTCAATGAGACCGTAGATCGGGCCCGCAATGAGGGCTCCCTCCCGCTCACGGGCCAATACAACCCTCGTGAATTCGTGATGTCCATCCAACGTCCCAGATCCGTTATCATCCTAGTCAAGGCGGGCGCCCCCGTCGACCAAACCATCGCCGCGCTCTCCGACCACCTCGAGCCCGGCGACTGCATCATTGACGGCGGTAACGAGTGGTATGAGAACACCGAGCGCCGCATCAGCCAAGTTGCCGACAAAGGTCTGCTCTACCTTGGCATGGGCGTCTCTGGCGGGGAAGATGGAGCGCGCTATGGCCCCTCTCTCATGCCCGGCGGTTCCAAAACAGCCTACAACAATGTACACGACATCCTCCACAAGATTGCCGCGCAGGTCGAAGACGGACCTTGCGTCACGTACATTGGCGAGGGAGGTTCTGGGAACTTCGTGAAGATGGTCCACAACGGAATCGAATACGGAGATATGCAACTCATCTCGGAGGCTTATGACGTGTTGAAGCACGTCGGTGGCCTGTCGAATCCCGAGCTTGCGGATGTCTTCGAAGAGTGGAACAGAGAGGAACTTGATAGTTTCTTGATTGAAATCACTGCGGATATTTTTAAGGTGAAGGATGAGGATGGTGAAGGATTTTTGGTAGATAAAGTTTTGGACAAGACAGGGATGAAGGGGACGGGGAAATGGACGGTGCAGCAGGCGGCGGAGCTGAAGGTAGCAGTTCCGACGATCGCGGCGTCGTTGGATTGCAGGTACTTGAGCGGGTTAAAGGAGGAAAGGGAGAATGCTGAGACTTTGTTGAAGGAGATGGGATTGAGTGATGATTTGGGGACAATTGGTGTGAGTGGGGTGGATAAGAAAAAGTTGATTGATGATGTTAGGCAGGCTTTGTATGCTTCAAAGATTTGTAGCTATGCTCAGGGGATGAATTTGTTGAGGGCCAAGAGTAGTGAGAAAGGGTGGAACTTGAATTTGGGAGAATTAGCTAGGATTTGGAAGGGAGGATGCATCATAAGGGCAGGGTTCTTGGACAGGATCAAGAAGGCTTATCAGAGGAACCCTAATTTGGATAATCTGATACTGGACCCCGAGTTTGGAAAGGAAATGAAGCAGAAGCAGGCTGCGTGGAGACGGGTGGTGAATTTGGCGGTTTCAGCTGGGATTACTACTCCGGGAATGTGTGCTAGTCTTTATTACTTTGATTCGTACCGGAGGAGTAAGCTGCCGGCGAACCTTGTTCAGGCTCAGAGGGACTTGTTTGGGGCCCATACATACGAGAGGGTTGATCGCCCTGGAGCTTTCCATACCGAGTGGACAAAGCTTGCACGCCAAATATCGATGCAGCTGAATGCTTCTCGAATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAGTGCGAGTCATCATCATGATCATGTGTACAGTTTAAAGATCTCATTGTTCAGGAACTTAGGCATTACAAGATGTTTGGTAGAATATTTAAGTGTGTTTGCTAAGACGGTCTTGGTGAGATGTCGGAAAGATGACCTGCACTTGGTAGGACACGTGCTGGATTCTGCTGCACAGGAGTATGCTGACAAAGAAAATGTTGATCCCCCAGAGATCATTGTTGACAACCAAGTCTATCTTCCTCCTGGACCCAGTCATCACAAGGGTGGTGCTAGCTTCTTGTGA 1836 0.5093 MESAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVNETVDRARNEGSLPLTGQYNPREFVMSIQRPRSVIILVKAGAPVDQTIAALSDHLEPGDCIIDGGNEWYENTERRISQVADKGLLYLGMGVSGGEDGARYGPSLMPGGSKTAYNNVHDILHKIAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNPELADVFEEWNREELDSFLIEITADIFKVKDEDGEGFLVDKVLDKTGMKGTGKWTVQQAAELKVAVPTIAASLDCRYLSGLKEERENAETLLKEMGLSDDLGTIGVSGVDKKKLIDDVRQALYASKICSYAQGMNLLRAKSSEKGWNLNLGELARIWKGGCIIRAGFLDRIKKAYQRNPNLDNLILDPEFGKEMKQKQAAWRRVVNLAVSAGITTPGMCASLYYFDSYRRSKLPANLVQAQRDLFGAHTYERVDRPGAFHTEWTKLARQISMQLNASRIKVLQAQDDVISSMKEAASKELLSASHHHDHVYSLKISLFRNLGITRCLVEYLSVFAKTVLVRCRKDDLHLVGHVLDSAAQEYADKENVDPPEIIVDNQVYLPPGPSHHKGGASFL* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04446 611 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 449 482 - -
Phac2g04446 611 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 186 448 - -
Phac2g04446 611 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 5 185 - -
Phac2g04446 611 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 480 IPR006114 GO:0004616|GO:0006098
Phac2g04446 611 Gene3D - 186 448 IPR013328 GO:0016491
Phac2g04446 611 Pfam ATP synthase (E/31 kDa) subunit 485 607 IPR002842 GO:0033178|GO:0046961|GO:1902600
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 370 392 IPR006183 GO:0004616
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Phac2g04446 611 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Phac2g04446 611 NCBIfam decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 9 481 IPR006113 GO:0004616|GO:0006098
Phac2g04446 611 Gene3D - 449 482 - -
Phac2g04446 611 Coils Coil 32 52 - -
Phac2g04446 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Phac2g04446 611 SMART 6PGD_2 184 481 IPR006114 GO:0004616|GO:0006098
Phac2g04446 611 Gene3D - 511 608 IPR038495 -
Phac2g04446 611 Gene3D - 5 185 - -
Phac2g04446 611 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 482 IPR008927 -
Phac2g04446 611 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 6 487 IPR006183 GO:0004616
Phac2g04446 611 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04446 Phac-Chr2 42501188 42504709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04446 488 602 Primary Pumps ATPases(2) AT1G64200 50.833 3.20e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04446 K00033 - gmx:100803740 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04446 2 42501188 42504709 Phac2g04446 2 42501188 42504709 ECH