Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04435 ATGGGTAACTGCAGCAGCAGCCACGGCGGCGGTGGCACGGCCGCTTCATCCACTTACTCCGACGAACTTCCCCGGCGCAACGGCATCACCGTCCTACCCCCGAACACGAACCCTTCACCCCCACTCCCGAAGCCCCAAGCGCCGTCCTCGCTGGGCCGCGTGCTGGGCCGGCCCATGGAGGACGTCCGGTCCATTTACATCTTCGGGCGCGAGCTGGGCCGCGGGCAGTTCGGCGTGACGTACCTGGTGACCCACAAGGCCACGAAGGAGCAGTTCGCGTGCAAGTCGATCGCAACGCGCAAGCTCGTGAACCGCGACGACATCGATGACGTCCGGCGCGAGGTCCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTGGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAATCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCACCAAGGGCCACTACTCAGAGCGCGCCGCCGCTAATTCCTGCCGCCAGATCGTGACGGTGGTGCACAATTGCCACTCCATGGGCGTGATGCACAGGGACTTGAAGCCCGAGAATTTCTTGCTGCTCAACAAGGACGATGATTCCCCTCTCAAGGCCACGGATTTTGGACTCTCCGTCTTCTTCAAGCCAGGTTATTTAGTTACTCAATATGGTGGTCACTGCTCATTGATTCTGCTTGTTGTTTATTGTGAAATTTATGAAAATGTTGGGGTTGTTGCAATGGTTGACTTGGAGAGCTGGGTTCTGAGAACAGGAGATGTGTTTAGAGACCTTGTTGGGAGCGCTTACTATGTTGCTCCTGAGGTGTTGAGAAAAAGTTATGGGCCTGAGGCTGATATTTGGAGTGCTGGGGTTATACTCTACATTCTGCTTTCTGGTGTTCCACCTTTCTGGGCAGAAAATGAACAAGGTATATTTGATGCAATTCTGCGTGGACATATTGATTTCGCATCGGATCCTTGGCCTTCCATATCAACTAGTGCCAAAGATCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTTCAGCAGTTGAAGTACTCAATCATCCCTGGATGAGAGTGGATGGAGATGCATCAGATAAGCCTCTTGATATTGCTGTTTTGTCCAGAATGAAACAATTCCGAGCAATGAACAAGCTAAAAAAAGTAGCCCTGAAGGTTATTGCTGAAAGTCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACATTTGAGGAGTTGAAAGCTGGTCTCCCAAAACTGGGCAGTAAACTTTCTGAGTCTGAAGTAAGGCAATTGATGGATGCGGCTGATGTAGATGGAAATGGAACCATTGATTACATTGAATTTATAACTGCTACCATGCACATGAATAGAATGGAAAGAGAGGATCATCTATATAAAGCCTTTGAATATTTTGACAATGATAAGAGCGGTTACATCACAATGGAAGAGTTGGAGTCTGCCCTCAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGATACTGACAATGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATATCCCACATAACCCAGAGACGTCGCAAATAA 1683 0.4955 MGNCSSSHGGGGTAASSTYSDELPRRNGITVLPPNTNPSPPLPKPQAPSSLGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLNKDDDSPLKATDFGLSVFFKPGYLVTQYGGHCSLILLVVYCEIYENVGVVAMVDLESWVLRTGDVFRDLVGSAYYVAPEVLRKSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISTSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAESLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMDAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDISHITQRRRK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04435 560 ProSiteProfiles Protein kinase domain profile. 66 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04435 560 SMART efh_1 448 476 IPR002048 GO:0005509
Phac2g04435 560 SMART efh_1 519 547 IPR002048 GO:0005509
Phac2g04435 560 SMART efh_1 412 440 IPR002048 GO:0005509
Phac2g04435 560 SMART efh_1 484 512 IPR002048 GO:0005509
Phac2g04435 560 FunFam Calcium-dependent protein kinase 1 68 151 - -
Phac2g04435 560 Pfam Protein kinase domain 68 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04435 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Phac2g04435 560 Gene3D - 373 549 - -
Phac2g04435 560 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Phac2g04435 560 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Phac2g04435 560 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Phac2g04435 560 FunFam Calcium-dependent protein kinase 1 373 548 - -
Phac2g04435 560 SUPERFAMILY Protein kinase-like (PK-like) 66 366 IPR011009 -
Phac2g04435 560 SMART serkin_6 66 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04435 560 ProSitePatterns EF-hand calcium-binding domain. 528 540 IPR018247 -
Phac2g04435 560 MobiDBLite consensus disorder prediction 1 54 - -
Phac2g04435 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 540 - -
Phac2g04435 560 MobiDBLite consensus disorder prediction 1 24 - -
Phac2g04435 560 CDD STKc_CAMK 66 364 - -
Phac2g04435 560 Pfam EF-hand domain pair 483 545 IPR002048 GO:0005509
Phac2g04435 560 Pfam EF-hand domain pair 413 473 IPR002048 GO:0005509
Phac2g04435 560 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
Phac2g04435 560 Gene3D Transferase(Phosphotransferase) domain 1 152 372 - -
Phac2g04435 560 ProSiteProfiles EF-hand calcium-binding domain profile. 515 550 IPR002048 GO:0005509
Phac2g04435 560 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Phac2g04435 560 SUPERFAMILY EF-hand 405 546 IPR011992 -
Phac2g04435 560 ProSiteProfiles EF-hand calcium-binding domain profile. 480 514 IPR002048 GO:0005509
Phac2g04435 560 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04435 Phac-Chr2 42400534 42416196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04435 52 559 EF-hand Containing Proteins AT4G23650 73.819 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac2g04435 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04435 K13412 - gmx:100777096 944.11