Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04400 ATGGCTCGGCAATTGTGTGAAGACAAATCCAAGGACATGGCTTCATCAACTGGGTTGTTCTACTCAGATGTGTCATCAAACAGCCCAACTCTCCAACCCCATCTGATGAACCACATCCAAGGCTTTGTGACCGACCCAGAGATGTTCAACCTCACCACTGGCATGGAGATGATAGGGTTTTCCAAGAACCTCCATCCACACAGTGAAAGCAACGGGGTCATGTGGAAAAGTTTCTTCGGCAAATCAAGTCAACACGCTGGTCCTTCCTCTTCCAAAACTATGAACGACTCTTCTTGCAATTTTTATAACCAGCATGAGTATAGTAATAAGCAAGATTTCACATCAGGGATTTCTGAAACAAGTAGCGAAAATTTAATAGTCGGTGGTGCCCATGATTCTGCCCCGTGGCAAGAGAACAGGTTAATGCTTGATGATTCTTCCTTAAGGTGCGTGTTCCCTTGTGAAGGTAACGAAAGGCCTAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCAAGTATTGGGTTGCAATCTTTTGAGCTACGACAAACAAACCATCATCAGCATCTTTCTGATTTTGTTTCAAGAGAGGGGTATTTTGGAAAATCAATCAATGCTCAACAGCAACAACAAATGTTGCAAGACGGGTATATGAGTCCTAACAAAGCTGCAAATATTTATCAGGGGCATTTTCTAATCAAGAACTCCAAGTTCTTGGTGCCTGCACAGCTCCTTCTGAACGAGTTTTGTAGTCTCGGAACAAAGGAAAATGATGTGCAAAAGCAGAAGCAGTCTCAAAAGAACAAGTGGGAAGAGGGTAACAACGGTGGTGGTTCCTCAAAGAACCATTCTCTTAGCTCTCTAGAGTTCGTGGAACTGCAGAAGAGAAAGACAAGGCTGCTCTCGATGCTGGAAGAGGTTGATAGAAGATACAAACATTACTGTAACCAAATGAAGGGTGTGGTCTCCTCCTTTGAAGCAGTGGCGGGTAACGGGGCAGCCACAGTTTACTCGGCTTTGGCTTTGAGAGCCATGTCTAGACATTTTAGGTGTCTGAAAGATGGAATCATGGAACAAATTCAAGCCACTAGAAAAGCTATGGGAGAGAAGGATCCCGTTGCACCAGGCACAACAAGGGGCGAAACACCAAGACTTAAAATAATTGACCAATCACTCAGACAACAAAGGGCCTTTCAACAAATTAGCATGATGGAAACCCATCCCTGGAGACCCCAACGTGGCCTTCCCGAACGATCCGTTTCAGTTCTTCGGGCTTGGCTTTTCGAGCACTTTCTTCATCCGTACCCAAGTGATGTCGATAAACACATCCTAGCCCGCCAAACTGGTCTCTCCAGAAGTCAGGTTTCGAATTGGTTTATTAACGCCAGGGTGAGGCTGTGGAAGCCGATGGTGGAGGAGATGTACTTGGAAGAAGAGAAGGAACAGCAAAACGACGTAGCATCGTCGGAGGGAGGAGGCACCAATCCCGAGGGGGATCAAAACGCGCCACGCGAGGATCAGAAGCCAACGCAGGCTCGGCTCCTCCGAATTGAGTCGGAGAGCGTGTCGTCCATGGTCACCAACACGGACCACAAAAACGACACGAAAAGCGGCAAAGGCCTCCAAAACGACAACCAATTGAACGACAACAGCCATCCCGCGGACGCGTTTGGGTCGGTGGAGCTTGACTTTTCGTCATACGCGCAGCACTCCTCCGGCGTGGTTGGTGGGGGCGTGTCGTTGACGCTAGGGTTACAGCAGCAGGGTGAAAGTGTGGTGAGTTTAGCGTTCCCGCCAGCGACTCAAAGCTCGATGTTCTACGCACGGGACCAGATAGAAGAGTGTCAAACAGTTCAGTACTCTCTTTTGGACGGCGAAGGACAAAACATGCCGTATAGGAATCTCATGGGGACACAATTGCTCCATGATTTGGTATGA 1944 0.4784 MARQLCEDKSKDMASSTGLFYSDVSSNSPTLQPHLMNHIQGFVTDPEMFNLTTGMEMIGFSKNLHPHSESNGVMWKSFFGKSSQHAGPSSSKTMNDSSCNFYNQHEYSNKQDFTSGISETSSENLIVGGAHDSAPWQENRLMLDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTNHHQHLSDFVSREGYFGKSINAQQQQQMLQDGYMSPNKAANIYQGHFLIKNSKFLVPAQLLLNEFCSLGTKENDVQKQKQSQKNKWEEGNNGGGSSKNHSLSSLEFVELQKRKTRLLSMLEEVDRRYKHYCNQMKGVVSSFEAVAGNGAATVYSALALRAMSRHFRCLKDGIMEQIQATRKAMGEKDPVAPGTTRGETPRLKIIDQSLRQQRAFQQISMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQNDVASSEGGGTNPEGDQNAPREDQKPTQARLLRIESESVSSMVTNTDHKNDTKSGKGLQNDNQLNDNSHPADAFGSVELDFSSYAQHSSGVVGGGVSLTLGLQQQGESVVSLAFPPATQSSMFYARDQIEECQTVQYSLLDGEGQNMPYRNLMGTQLLHDLV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04400 647 Gene3D - 414 476 - -
Phac2g04400 647 FunFam BEL1-like homeodomain protein 4 414 476 - -
Phac2g04400 647 SMART HOX_1 411 475 IPR001356 GO:0003677
Phac2g04400 647 CDD homeodomain 411 472 IPR001356 GO:0003677
Phac2g04400 647 MobiDBLite consensus disorder prediction 479 556 - -
Phac2g04400 647 MobiDBLite consensus disorder prediction 259 286 - -
Phac2g04400 647 ProSiteProfiles 'Homeobox' domain profile. 408 471 IPR001356 GO:0003677
Phac2g04400 647 MobiDBLite consensus disorder prediction 271 286 - -
Phac2g04400 647 MobiDBLite consensus disorder prediction 516 533 - -
Phac2g04400 647 Pfam Associated with HOX 235 358 IPR006563 -
Phac2g04400 647 SUPERFAMILY Homeodomain-like 412 477 IPR009057 -
Phac2g04400 647 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 131 500 - -
Phac2g04400 647 Pfam Homeobox KN domain 428 467 IPR008422 GO:0003677|GO:0006355
Phac2g04400 647 MobiDBLite consensus disorder prediction 541 555 - -
Phac2g04400 647 SMART prehox3 229 360 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04400 Phac-Chr2 42128386 42132787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04400 138 647 Homeobox Transcription Factor Family AT5G41410 49.378 9.34e-143 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac2g04400 POX 3.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04400 - - gmx:100792789 1006.9