Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04399 ATGGCTCGGCAATTGTGTGAAGACAAATCCAAGGACATGGCTTCATCAACTGGGTTGTTCTACTCAGATGTGTCATCAAACAGCCCAACTCTCCAACCCCATCTGATGAACCACATCCAAGGCTTTGTGACCGACCCAGAGATGTTCAACCTCACCACTGGCATGGAGATGATAGGGTTTTCCAAGAACCTCCATCCACACAGTGAAAGCAACGGGGTCATGTGGAAAAGTTTCTTCGGCAAATCAAGTCAACACGCTGGTCCTTCCTCTTCCAAAACTATGAACGACTCTTCTTGCAATTTTTATAACCAGCATGAGTATAGTAATAAGCAAGATTTCACATCAGGGATTTCTGAAACAAGTAGCGAAAATTTAATAGTCGGTGGTGCCCATGATTCTGCCCCGTGGCAAGAGAACAGGTTAATGCTTGATGATTCTTCCTTAAGGTGCGTGTTCCCTTGTGAAGGTAACGAAAGGCCTAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCAAGTATTGGGTTGCAATCTTTTGAGCTACGACAAACAAACCATCATCAGCATCTTTCTGATTTTGTTTCAAGAGAGGGGTATTTTGGAAAATCAATCAATGCTCAACAGCAACAACAAATGTTGCAAGACGGGTATATGAGTCCTAACAAAGCTGCAAATATTTATCAGGGGCATTTTCTAATCAAGAACTCCAAGTTCTTGGTGCCTGCACAGCTCCTTCTGAACGAGTTTTGTAGTCTCGGAACAAAGGAAAATGATGTGCAAAAGCAGAAGCAGTCTCAAAAGAACAAGTGGGAAGAGGGTAACAACGGTGGTGGTTCCTCAAAGAACCATTCTCTTAGCTCTCTAGAGTTCGTGGAACTGCAGAAGAGAAAGACAAGGCTGCTCTCGATGCTGGAAGAGGTTGATAGAAGATACAAACATTACTGTAACCAAATGAAGGGTGTGGTCTCCTCCTTTGAAGCAGTGGCGGGTAACGGGGCAGCCACAGTTTACTCGGCTTTGGCTTTGAGAGCCATGTCTAGACATTTTAGGTGTCTGAAAGATGGAATCATGGAACAAATTCAAGCCACTAGAAAAGCTATGGGAGAGAAGGATCCCGTTGCACCAGGCACAACAAGGGGCGAAACACCAAGACTTAAAATAATTGACCAATCACTCAGACAACAAAGGGCCTTTCAACAAATTAGCATGATGGAAACCCATCCCTGGAGACCCCAACGTGGCCTTCCCGAACGATCCGTTTCAGTTCTTCGGGCTTGGCTTTTCGAGCACTTTCTTCATCCGTACCCAAGTGATGTCGATAAACACATCCTAGCCCGCCAAACTGGTCTCTCCAGAAGTCAGGCACGTGTACATATATCTTCATTCATTTGCATTTGA 1404 0.448 MARQLCEDKSKDMASSTGLFYSDVSSNSPTLQPHLMNHIQGFVTDPEMFNLTTGMEMIGFSKNLHPHSESNGVMWKSFFGKSSQHAGPSSSKTMNDSSCNFYNQHEYSNKQDFTSGISETSSENLIVGGAHDSAPWQENRLMLDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTNHHQHLSDFVSREGYFGKSINAQQQQQMLQDGYMSPNKAANIYQGHFLIKNSKFLVPAQLLLNEFCSLGTKENDVQKQKQSQKNKWEEGNNGGGSSKNHSLSSLEFVELQKRKTRLLSMLEEVDRRYKHYCNQMKGVVSSFEAVAGNGAATVYSALALRAMSRHFRCLKDGIMEQIQATRKAMGEKDPVAPGTTRGETPRLKIIDQSLRQQRAFQQISMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQARVHISSFICI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04399 467 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 124 456 - -
Phac2g04399 467 CDD homeodomain 411 456 IPR001356 GO:0003677
Phac2g04399 467 MobiDBLite consensus disorder prediction 259 286 - -
Phac2g04399 467 Gene3D - 417 462 - -
Phac2g04399 467 MobiDBLite consensus disorder prediction 271 286 - -
Phac2g04399 467 SMART prehox3 229 360 IPR006563 -
Phac2g04399 467 Pfam Homeobox KN domain 428 456 IPR008422 GO:0003677|GO:0006355
Phac2g04399 467 SUPERFAMILY Homeodomain-like 412 459 IPR009057 -
Phac2g04399 467 Pfam Associated with HOX 235 358 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04399 Phac-Chr2 42128386 42132787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04399 138 457 Homeobox Transcription Factor Family AT5G41410 50.829 1.33e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04399 - - gmx:100787954 772.696