Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04386 ATGCTTCAGTATCCAAGAGCATCAGAGGAGCATGTTCCTCTATCATCTCACCAGGGTGCCGCTTCTGCTTTCTCTGGACGACTCTTGGTTGATACTAATCTAGATACTTCATCTCCTGATACTTATAGACCTCCTCCTGCTCCTATCCCTTTCAATGTTACTTTTGGTACCACTCAAACTCCACCTGTAACTCAAGAAATTCGTAGTGACAAGAATAATGCATCGTTTCATTCCACAAATTCTAGTACAATTCAAGAACAAGTATCTGGAGACAATCATGGGACCCCAGTTAAGATGGAAGAGCTGAAGGAATCAGAATGCAAAGTTCAGACTGATCTAGAGTTAGATTCTGCTAAGGATTCTGAAATTGAACTTGCAAAGTCAGGAAAACCTGTAGTTTTAGTAGAAGAGGAGGATACATGCCCAATTTGTTTAGAAGAATATGATGCAGAGAATCCAAAACTTGCAACACAGTGTGATCATCATTTTCACCTTGCATGTATTCTGGAATGGATGGAAAGAAGTGAAACTTGTCCTGTGTGCGATCAGGATTTGGTTTTCAACCCTCCCATTGAATAA 579 0.4041 MLQYPRASEEHVPLSSHQGAASAFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTFGTTQTPPVTQEIRSDKNNASFHSTNSSTIQEQVSGDNHGTPVKMEELKESECKVQTDLELDSAKDSEIELAKSGKPVVLVEEEDTCPICLEEYDAENPKLATQCDHHFHLACILEWMERSETCPVCDQDLVFNPPIE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04386 192 MobiDBLite consensus disorder prediction 1 21 - -
Phac2g04386 192 SUPERFAMILY RING/U-box 134 188 - -
Phac2g04386 192 ProSiteProfiles Zinc finger RING-type profile. 141 182 IPR001841 -
Phac2g04386 192 Pfam Ring finger domain 139 181 IPR001841 -
Phac2g04386 192 SMART ring_2 141 181 IPR001841 -
Phac2g04386 192 FunFam Putative E3 ubiquitin-protein ligase RHB1A 118 186 - -
Phac2g04386 192 MobiDBLite consensus disorder prediction 73 92 - -
Phac2g04386 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 187 IPR013083 -
Phac2g04386 192 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 17 188 - -
Phac2g04386 192 MobiDBLite consensus disorder prediction 73 96 - -
Phac2g04386 192 CDD RING-H2_AIRP1-like 137 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04386 Phac-Chr2 42038725 42041966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04386 4 188 C3H Transcription Factor Family AT5G41350 53.191 1.61e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04386 - - gmx:100816369 360.533