Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04352 ATGATATGGGTTGGGATGGGTTGTGAGTTTTCTAAGTACACAACATGCTGCATGGGTACAGAGGAGGATGGTCATCCGGCTCCTGAGGACCAGGTTGATGGTGAAAACGAAGACAATATTGTTGAGAGCATTGACTTGCCACGGTTTCATGAATTCACCATTGATCAGCTTAGGAGGGCTACATCCGGATTTGCTGTTGAAAATATAGTTTCTGAGCATGGAGAAAAAGCTCCAAATGTGGTCTATAAAGGGAAACTTGATAATCAGATGCGAATTGCTGTTAAACGGTTCAACAGAAATGCCTGGCCTGATGCGCAGCCATTTTTGGAGGAGGCCAGGGCTGTTGGTCAACTGAGGAGCCAGCGATTGATAAATCTGCTAGGATGTTGCTGTGAAGGTGACGAGAGGTTACTTGTTGCAGAATATATGCCCAATGATACGTTGGCAAAACATTTATTCCATTGGGAAAATCAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCATTATGCCTTGCCCAAGCTCTTGAGTATTGTACTAGCAATGGACGTGCACTATATCATGATCTAAATGCCTACAGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCATGCTTCGGTTTGATGAAAAATAGCAGAGATGGAAAAAGTTATAGTACGAATTTGGCGTTTACTCCACCTGAATATCTAAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTACAGCTTTGGCACACTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCCCTTGACCTAATTAGAGACAAGAACCTTCAGATGCTATCAGACTCTTGCTTAGAAGGGGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCCTCACTATGTTTGCAATCTGAACCACGAGAGCGTCCTAGTCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCGCGTACTGATGGGCATACCAGATGGTACATCTACTTTCCCCCTTACACCTCTAGGAGAAGCTTGTCTACGAATGGATCTGACTGCTCTGCATGAGGTGATGGAGAAAATGGGGTATAAAGACGATGAGGGCGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACGTTGAACTCAAAGAAGAAAGGGGATGCTGCTTTTCGGCTTAAGGATTCTAAAACGGCAATTGATAGCTATACGCTGTTCATTGATGTTGGAACCATGGTTTCTCCAACGGTTTATGCACGTCGTAGTTTATGTTATCTTATGAGCAACATGGCTGATGAAGCACTTAATGATGCAATGCAAGCCCAAGTAATATCCCCCATTTGGTACATTGCGTTTTATTTACAAGCAGTTGCACTTTTAGCAATGGGCAAGGAGAATGATGCCCAAATGGCACTTAAAGAGGGTTCCTCGCTTGAAATTAAAAAGAGCACAAATTAG 1488 0.4368 MIWVGMGCEFSKYTTCCMGTEEDGHPAPEDQVDGENEDNIVESIDLPRFHEFTIDQLRRATSGFAVENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPDAQPFLEEARAVGQLRSQRLINLLGCCCEGDERLLVAEYMPNDTLAKHLFHWENQPMRWAMRMRVALCLAQALEYCTSNGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASLCLQSEPRERPSPKSLVAALIPLQKDSEVPSRVLMGIPDGTSTFPLTPLGEACLRMDLTALHEVMEKMGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRLKDSKTAIDSYTLFIDVGTMVSPTVYARRSLCYLMSNMADEALNDAMQAQVISPIWYIAFYLQAVALLAMGKENDAQMALKEGSSLEIKKSTN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04352 495 Gene3D Phosphorylase Kinase; domain 1 39 142 - -
Phac2g04352 495 FunFam probable serine/threonine-protein kinase At4g35230 388 495 - -
Phac2g04352 495 SUPERFAMILY TPR-like 394 487 IPR011990 GO:0005515
Phac2g04352 495 Gene3D Tetratricopeptide repeat domain 388 495 IPR011990 GO:0005515
Phac2g04352 495 SUPERFAMILY Protein kinase-like (PK-like) 46 327 IPR011009 -
Phac2g04352 495 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 30 493 IPR045845 GO:0004672|GO:0009742
Phac2g04352 495 FunFam probable serine/threonine-protein kinase At5g41260 144 335 - -
Phac2g04352 495 Pfam Protein tyrosine and serine/threonine kinase 80 317 IPR001245 GO:0004672|GO:0006468
Phac2g04352 495 FunFam probable serine/threonine-protein kinase At4g35230 39 142 - -
Phac2g04352 495 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04352 495 Gene3D Transferase(Phosphotransferase) domain 1 144 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04352 Phac-Chr2 41798106 41809851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04352 25 343 Glycoside Hydrolase AT3G07070 32.092 7.52e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Phac2g04352 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04352 K14500 - gmx:100819210 923.694