Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04347 ATGATTTGTAGTTTTACTGTTGACACTCTCTTTGTGCTTGATGTCTCCATGACATTTTGTTCTCAGGAAGAGACCATTCGCGAGGCCATTGAAGATGCTGGATTCCAAGCCACATTAATCAGAGATGATAACGAGACATCTGTTCAGATATGCCGCATACGTATCCAAGGCATGACATGCACGTCGTGTTCCACCACTGTTGAGTCTGCACTTCAATCAATCCAAGGAGTGGTGAAAGCTCAAGTGGCCCTTGCAACTGAGGAAGCTGAAGTTCACTACACTCCAAACGTTGTCACCTACAACCAAATCTTGGAAGCTGTAGAAGACACTGGTTTTCAAGCCACGCTTATCAGCACAGGTGAAGACATGAGCAGAATAGACCTTCAGGTAGAGGGCATAAGGACGGGTCGTTCCATGAGACTAATTGAAAATTCTCTTCAAGCCCTCCCTGGAGTCCAAGGTGTAGAAACACACCCTTTGTTGAACAAAGTGTCTCTTTCTTATAAACCAGACTTGACAGGACCAAGAAATTTCATTAACGTGATTGAAGAAACCGGGTCTAGGCGTTTCAAGGCAAAGATTTTTCCGGAAGGAGGGAGAAGGAATAGTCATAGGAGGGAGGAAATCAAGCAATACTATAGATCCTTCTTGTGGAGTTTGGTGTTTACTATTCCTGTGTTTCTAACGTCCATGGTGCTTATGTATATCCCTGGAATTAAGCATGGACTAGATGCCAAAGTTGTTAAAATGCTTACAGTGGGGGAGATTATAAGATTTGTGCTTGCTACACCAGTACAGTTCATTATAGGGAAGAGGTTTTACTCTGGTGCTTACAAAGCATTACGCCTTGGCTCTCCCAACATGGATGTTTTGATTGCCTTGGGGACAAACGCAGCATACTTTTACTCAGTGTATTCTGTGCTGAGAGCTGCTACCTCTAATGATTTTAAGGGTACTGATTTCTTTGAGACCAGTGCTATGCTTATTTCGTTTATTTTGCTAGGGAAGTACCTTGAGGTTTTGGCCAAGGGGAAGACATCCGATGCAATTGCCAAGCTCATGAACTTGACACCTGACACTGCTATATTGTTGACGTTGGACAGTGAAGGAAATGTTGTTGGTGAGGAGGAAATTGATAGCAGGTTGATTCAGAAGAATGATGTCATTAAGATCATTCCTGGTGCAAAAGTGGCTTCCGATGGATTTGTTATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATAACTGGTGAGGCACGTCCTGTGGCAAAGAGGAAAGGGGATACTGTTATTGGAGGGACTGTGAATCAAAATGGAGTGTTGCATATTAAGGCTACATGGGTGGGATCAGAGAGTGCGCTTGCTCAGATTGTCAGACTTGTTGAGTCAGCACAGATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGCATTTCCAAATACTTTGTGCCTATGGTTATTGTAATCTCATTTTCAACTTGGCTTGCCTGGTTTATAGCTGGAAGGGTTAGTGCTTACCCGAAGTCTTGGATACCATCTTCCATGGATAGCTTTCAGCTTGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCCTGTCCATGTGCTTTAGGTTTAGCAACACCAACTGCAGTCATGGTTGGTACTGGAGTAGGTGCATCACAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGCGTTGTATTTGACAAGACAGGTACTCTCACTATCGGGAAGCCTGTGGTAGTTAATACAAAGTTGTTAACAAATATGGTACTCCGAGAATTCTATGAACTTGTGGCGGCAGCTGAGGTGAATAGTGAGCATCCCCTGGCGAAGGCCACTGTAGAGTATGCTAAAAGACTGAGAGATGAAGAGAACCCCATTTGGCCTGAGGCACGGGAATTTGTGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAATAAGGAAATACTTGTGGGTAACAAGACCTTGATGGCGGACCACAATGTTGCACTTCCTGCTGATGCTGAAGAGATACTGGCAGAAGCGGAAGCAATGGCTCAAACTGGAATTCTAGTGTCTATAAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCTCAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTTACTGGGGATAATTGGGGAACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACTGTTATTGCTGAAGCCAAACCTGGGCAGAAGGCTGAGCAAGTGAAGGACTTGCAGGCTTCTGGGCAAAGGGTGGCTATGGTGGGGGATGGTATCAATGACTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATAGGTGCCGGTACAGACATTGCTATTGAGGCTGCTGATATTGTCCTAATGAAGAGTAATTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTTCCCGTATCCGTCTCAACTACATATGGGCGTTGGGCTATAATCTGCTAGGAATTCCAATTGCTGCTGGAGCTATTTTTCCTTCTACACGATTTCGGTTGCCACCATGGGTTGCTGGGGCTGCCATGGCTGCCTCTTCTGTCAGTGTGGTTTGCTGTTCTCTACTATTGAAGTATTATAGGAGACCCAAGAAGCTGGACAATCTTGAGATACGGGGCATAAGCATTGAGTGA 2727 0.4459 MICSFTVDTLFVLDVSMTFCSQEETIREAIEDAGFQATLIRDDNETSVQICRIRIQGMTCTSCSTTVESALQSIQGVVKAQVALATEEAEVHYTPNVVTYNQILEAVEDTGFQATLISTGEDMSRIDLQVEGIRTGRSMRLIENSLQALPGVQGVETHPLLNKVSLSYKPDLTGPRNFINVIEETGSRRFKAKIFPEGGRRNSHRREEIKQYYRSFLWSLVFTIPVFLTSMVLMYIPGIKHGLDAKVVKMLTVGEIIRFVLATPVQFIIGKRFYSGAYKALRLGSPNMDVLIALGTNAAYFYSVYSVLRAATSNDFKGTDFFETSAMLISFILLGKYLEVLAKGKTSDAIAKLMNLTPDTAILLTLDSEGNVVGEEEIDSRLIQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNQNGVLHIKATWVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPMVIVISFSTWLAWFIAGRVSAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYELVAAAEVNSEHPLAKATVEYAKRLRDEENPIWPEAREFVSIAGHGVKAMVRNKEILVGNKTLMADHNVALPADAEEILAEAEAMAQTGILVSINREVVGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIETVIAEAKPGQKAEQVKDLQASGQRVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGAIFPSTRFRLPPWVAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04347 908 CDD P-type_ATPase_Cu-like 214 889 - -
Phac2g04347 908 SUPERFAMILY HMA, heavy metal-associated domain 48 120 IPR036163 GO:0046872
Phac2g04347 908 SUPERFAMILY Calcium ATPase, transduction domain A 375 461 IPR008250 -
Phac2g04347 908 ProSitePatterns E1-E2 ATPases phosphorylation site. 577 583 IPR018303 -
Phac2g04347 908 Gene3D - 124 186 - -
Phac2g04347 908 Gene3D - 343 465 - -
Phac2g04347 908 Gene3D - 542 836 IPR023214 -
Phac2g04347 908 SUPERFAMILY HAD-like 574 885 IPR036412 -
Phac2g04347 908 FunFam Copper-transporting ATPase 1, putative 343 465 - -
Phac2g04347 908 NCBIfam HAD-IC family P-type ATPase 328 861 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac2g04347 908 ProSiteProfiles Heavy-metal-associated domain profile. 124 190 IPR006121 GO:0046872
Phac2g04347 908 FunFam Probable copper-transporting ATPase HMA5 662 836 - -
Phac2g04347 908 ProSitePatterns Heavy-metal-associated domain. 55 84 IPR017969 GO:0046872
Phac2g04347 908 SUPERFAMILY HMA, heavy metal-associated domain 120 187 IPR036163 GO:0046872
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 704 715 - -
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 779 798 - -
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 802 814 - -
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 411 425 - -
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 726 736 - -
Phac2g04347 908 PRINTS P-type cation-transporting ATPase superfamily signature 575 589 - -
Phac2g04347 908 Gene3D - 660 710 IPR023299 GO:0000166
Phac2g04347 908 Gene3D - 582 659 IPR023299 GO:0000166
Phac2g04347 908 Pfam E1-E2 ATPase 374 553 - -
Phac2g04347 908 CDD HMA 53 115 IPR006121 GO:0046872
Phac2g04347 908 FunFam Copper-transporting ATPase HMA5 48 119 - -
Phac2g04347 908 NCBIfam heavy metal translocating P-type ATPase 288 888 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phac2g04347 908 SFLD p-type atpase 557 831 IPR044492 -
Phac2g04347 908 SFLD Haloacid Dehalogenase 557 831 - -
Phac2g04347 908 Gene3D - 49 121 - -
Phac2g04347 908 SUPERFAMILY Calcium ATPase, transmembrane domain M 314 859 IPR023298 -
Phac2g04347 908 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 20 904 - -
Phac2g04347 908 Pfam haloacid dehalogenase-like hydrolase 571 793 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 216 237 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 50 75 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 271 296 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 105 125 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 251 271 - -
Phac2g04347 908 PRINTS Copper-transporting ATPase 1 signature 76 99 - -
Phac2g04347 908 ProSiteProfiles Heavy-metal-associated domain profile. 49 115 IPR006121 GO:0046872
Phac2g04347 908 Pfam Heavy-metal-associated domain 53 112 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04347 Phac-Chr2 41763933 41767803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04347 24 908 Primary Pumps ATPases AT1G63440 79.012 0.0 1448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04347 K17686 - gmx:100810141 1620.52