Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04299 ATGTCGGAATCTCGCCCCCCTAAGCGCCCCAAAATAACTAGGGGGGACGATGATTATATGCCGGGAAATATTCTTGAGATTGAGCTTTGTAATTTCATGACGTTTGACTACTTAAAATGCAAACCTGGGCCTCGACTGAATCTTGTAATTGGACCCAATGGTTCTGGTAAGAGTTCGCTTGTATGTGCTATCGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGTGCTACAAGTATTGGGGCATATGTGAAGCGTGGAGAAGAATCTGGCTACATTAAGATCACCTTGAGAGGGGACCACAAAGAGGAACACATTAGCATTATGCGGAAAATTAGTACTAATAACAAGTCTGAATGGTTGTTCAATGGAAATGTGGTGTCTAAAAAGGATGTGGCTGAAACCATTCAAAGGTTTAACATACAAGTCAATAATTTGACCCAGTTTCTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTTGAACTTCTGGAAGAGACTGAAAAGGCTGTTGGCGATCCACAGCTTCCAGAGCAACATCGAACACTAATTGATAAAAGCCGTTCATTGAAACATCTTGAGTTGTCTCTGGAGAAAAATGAAGGAACCTTAAAACAGTTGAAGGAACGAAATGCTGAATTAGAGACGGATGTTGAGCGTGTTCGTCAAAGAGAGGAACTTCTTGCCAAGGTTGAAGCAATGAAAAAGAAGTTGCCATGGCTGAGGTATGATATGAAGCAGGCAGAATACCGGGAAGCTAAGGAGCGTGAGAATGATGCAGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCTGTTATGAAACATAAAGAAGAGAAGGCTGCAATAGATGCAAAATGCAAAAAGGTTAATCGCAATATAAATGAGAATTCAAAGAAGAGAAACGAGCTTATGGAGGAGGAGAACAAATTGGATGTGGAATTACAAGGAAAATACAAAGAAATGGAAGAGTTGAGGAGACAAGAAGAAACACGACAACAAAAACTTGTAAAAGCAAGGGAGGAACTTGCTATTGCTGAACATGAACTTGAGAACCTACCCTCTTATGTACCTCCCAAGGATGAGCTTCAAAGACTAAGAGCTGAAATTGGGGAATTGGATTATTCTGCTAATCAAGTGAGGCAGAATAAGTCGCAAGCAGAGAATGAAATAAAGCGTAAGAAGTCATTTATGATGCAGAATAAAGAGAGGTTGATGGAAATGAATAATAAAAGTACGAAGTGTTTGCATGTATTACAAAGGTCAGGGGCTGAAAAAATTATTGAAGCTTATAAATGGGTCCAAGAACATCGGCATGAATTCAATAAGGAGGTTTACGGCCCAGTTTTAGTAGAGGTGAATGTATCAAATAAGGTTCATGCTGCATATCTAGAGGGTCAAGTGGCTCACTACACTTGGAAGTCCTTCATAACACAAGATTCTGGTGATCGAGATCTTTTGGTGAAACACCTGCAGTTCTTTGATGTGCCAGTTTTAAATTATACCGGTGGTGATGATGGCCACCAAAGAGAGCCTTTTGAAAATTCTGAAGATAAGCGTGCTCTTGGCATATACTCCCGGCTGGATCAAATTTTTGATGCTCCTATTGCTGTGAAGGAGGTTTTGATTAGCCAGTTTAATCTAGATTATTCATATATTGGATCCAACGAAACTGATCAGAATGCTGATGAGGTCCCAAAATTGGGAATTACAGATTTGTGGACACCTGAAAATCACTATCGTTGGTCCAAGTCTAGATATGGAAGTCATGTCTCTACAGTCGTTCAACAAGTGGAACGCCCACAACTTTTAGTGAATAATTTGGATGTTGGGGAAATTGAGAAGCTGCGTTCTCAGCAAAAGGAGCTTGAAGAAGTCGTTGCTAATTTGGAGGAATGTGTTAAAAAGTTTCAAGATGAAGAAAGAAGCTTAGTGAATCAAGCTGCCAATCTTCGCAAGCAGTGGGAAGGCATTAGTATTACAGTACAGAATGAACACAGAAATCGTCAAACACTCATTAGCCGTATTGATCAGAGGAAAGGGTATTTAAAAGTGATGGAGGAACGGGATGATTTAGATACTGAGATAGCAAAGCTTGTTCATCAGGCTTCCAAGTATAATATTCAGCGTTTCCATAATGCAATGGAAATTAAGGATCTTCTTGTCGAAGCTGTGAGTTACAGAAGAATTTTTATTGAACAACGTATGGCTTTTATTGAATTTGATGCAAAGATTGGAGAAATGGACGCCAACCTGAAGCAGCATGACAATTTGGCTGTGCAAGCATCATTGCACTTTGAAAACTGTAAGAAAGAATCTGAGAATTGTAGACAGAAGCTTACAGATTCCTTGAAGTATGCTAAATCAATTGCTCAGCTTACATCTGAGCTAAAGAAGGAATTTCTCGAGATGCCTACTACAATTGAGGAACTGGAGGCAGCTATCCAGGATACCACTTCTCAAGCCAATTCAATTCTCTTTGTCAATCATAACATATTGGAACAATATAAAGATCGTCAACGGCAGATAGAAGATCTTGCAGCAAAACTGGAAGCAGACAAAAAGGAATCTACACGGTGTTTGGCTGAATTAAATAACATTAAGGGAAAATGGCTTCCTACATTGAGAAACCTTGTGGTAAAAATAAATGAAACTTTCAGTTATAATTTCCAAGAGATGGCAGTTGCTGGAGAAGTTTCGCTAGATGAGCATGATATAGATTTTGATCAATTTGGAATACTGATAAAAGTTAAATTCAGAGAAAATGGACAACTTAATGTTTTGAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTGACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAATTAGTGCGAGCAGCAAGCAAGCCAAATACACCCCATACTCAATAA 3006 0.3969 MSESRPPKRPKITRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEEHISIMRKISTNNKSEWLFNGNVVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVELLEETEKAVGDPQLPEQHRTLIDKSRSLKHLELSLEKNEGTLKQLKERNAELETDVERVRQREELLAKVEAMKKKLPWLRYDMKQAEYREAKERENDAAKALEEAAKLLNDLKEPVMKHKEEKAAIDAKCKKVNRNINENSKKRNELMEEENKLDVELQGKYKEMEELRRQEETRQQKLVKAREELAIAEHELENLPSYVPPKDELQRLRAEIGELDYSANQVRQNKSQAENEIKRKKSFMMQNKERLMEMNNKSTKCLHVLQRSGAEKIIEAYKWVQEHRHEFNKEVYGPVLVEVNVSNKVHAAYLEGQVAHYTWKSFITQDSGDRDLLVKHLQFFDVPVLNYTGGDDGHQREPFENSEDKRALGIYSRLDQIFDAPIAVKEVLISQFNLDYSYIGSNETDQNADEVPKLGITDLWTPENHYRWSKSRYGSHVSTVVQQVERPQLLVNNLDVGEIEKLRSQQKELEEVVANLEECVKKFQDEERSLVNQAANLRKQWEGISITVQNEHRNRQTLISRIDQRKGYLKVMEERDDLDTEIAKLVHQASKYNIQRFHNAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIGEMDANLKQHDNLAVQASLHFENCKKESENCRQKLTDSLKYAKSIAQLTSELKKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNILEQYKDRQRQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVVKINETFSYNFQEMAVAGEVSLDEHDIDFDQFGILIKVKFRENGQLNVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPHTQ* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04299 1001 Gene3D - 23 229 IPR027417 -
Phac2g04299 1001 Coils Coil 842 876 - -
Phac2g04299 1001 Coils Coil 296 358 - -
Phac2g04299 1001 Coils Coil 251 278 - -
Phac2g04299 1001 Pfam RecF/RecN/SMC N terminal domain 25 989 IPR003395 -
Phac2g04299 1001 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 998 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Phac2g04299 1001 Coils Coil 622 663 - -
Phac2g04299 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 782 994 IPR027417 -
Phac2g04299 1001 Gene3D - 847 1000 IPR027417 -
Phac2g04299 1001 Coils Coil 372 392 - -
Phac2g04299 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 285 IPR027417 -
Phac2g04299 1001 Coils Coil 194 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04299 Phac-Chr2 41436035 41454724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04299 1 999 Structural Maintenance of Chromosomes family AT5G15920 61.562 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04299 K22803 - gmx:100778678 1743.78