Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04298 ATGTCGGAATCTCGCCCCCCTAAGCGCCCCAAAATAACTAGGGGGGACGATGATTATATGCCGGGAAATATTCTTGAGATTGAGCTTTGTAATTTCATGACGTTTGACTACTTAAAATGCAAACCTGGGCCTCGACTGAATCTTGTAATTGGACCCAATGGTTCTGGTAAGAGTTCGCTTGTATGTGCTATCGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGTGCTACAAGTATTGGGGCATATGTGAAGCGTGGAGAAGAATCTGGCTACATTAAGATCACCTTGAGAGGGGACCACAAAGAGGAACACATTAGCATTATGCGGAAAATTAGTACTAATAACAAGTCTGAATGGTTGTTCAATGGAAATGTGGTGTCTAAAAAGGATGTGGCTGAAACCATTCAAAGGTTTAACATACAAGTCAATAATTTGACCCAGTTTCTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTTGAACTTCTGGAAGAGACTGAAAAGGCTGTTGGCGATCCACAGCTTCCAGAGCAACATCGAACACTAATTGATAAAAGCCGTTCATTGAAACATCTTGAGTTGTCTCTGGAGAAAAATGAAGGAACCTTAAAACAGTTGAAGGAACGAAATGCTGAATTAGAGACGGATGTTGAGCGTGTTCGTCAAAGAGAGGAACTTCTTGCCAAGGTTGAAGCAATGAAAAAGAAGTTGCCATGGCTGAGGTATGATATGAAGCAGGCAGAATACCGGGAAGCTAAGGAGCGTGAGAATGATGCAGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCTGTTATGAAACATAAAGAAGAGAAGGCTGCAATAGATGCAAAATGCAAAAAGGTTAATCGCAATATAAATGAGAATTCAAAGAAGAGAAACGAGCTTATGGAGGAGGAGAACAAATTGGATGTGGAATTACAAGGAAAATACAAAGAAATGGAAGAGTTGAGGAGACAAGAAGAAACACGACAACAAAAACTTGTAAAAGCAAGGGAGGAACTTGCTATTGCTGAACATGAACTTGAGAACCTACCCTCTTATGTACCTCCCAAGGATGAGCTTCAAAGACTAAGAGCTGAAATTGGGGAATTGGATTATTCTGCTAATCAAGTGAGGCAGAATAAGTCGCAAGCAGAGAATGAAATAAAGCGTAAGAAGTCATTTATGATGCAGAATAAAGAGAGGTTGATGGAAATGAATAATAAAAGTACGAAGTGTTTGCATGTATTACAAAGGTCAGGGGCTGAAAAAATTATTGAAGCTTATAAATGGGTCCAAGAACATCGGCATGAATTCAATAAGGAGGTTTACGGCCCAGTTTTAGTAGAGGTGAATGTATCAAATAAGGTTCATGCTGCATATCTAGAGGGTCAAGTGGCTCACTACACTTGGAAGTCCTTCATAACACAAGATTCTGGTGATCGAGATCTTTTGGTGAAACACCTGCAGTTCTTTGATGTGCCAGTTTTAAATTATACCGGTGGTGATGATGGCCACCAAAGAGAGCCTTTTGAAAATTCTGAAGATAAGCGTGCTCTTGGCATATACTCCCGGCTGGATCAAATTTTTGATGCTCCTATTGCTGTGAAGGAGGTTTTGATTAGCCAGTTTAATCTAGATTATTCATATATTGGATCCAACGAAACTGATCAGAATGCTGATGAGGTCCCAAAATTGGGAATTACAGATTTGTGGACACCTGAAAATCACTATCGTTGGTCCAAGTCTAGATATGGAAGTCATGTCTCTACAGTCGTTCAACAAGTGGAACGCCCACAACTTTTAGTGAATAATTTGGATGTTGGGGAAATTGAGAAGCTGCGTTCTCAGCAAAAGGAGCTTGAAGAAGTCGTTGCTAATTTGGAGGAATGTGTTAAAAAGTTTCAAGATGAAGAAAGAAGCTTAGTGAATCAAGCTGCCAATCTTCGCAAGCAGTGGGAAGGCATTAGTATTACAGTACAGAATGAACACAGAAATCGTCAAACACTCATTAGCCGTATTGATCAGAGGAAAGGGTATTTAAAAGTGATGGAGGAACGGGATGATTTAGATACTGAGATAGCAAAGCTTGTTCATCAGGCTTCCAAGTATAATATTCAGCGTTTCCATAATGCAATGGAAATTAAGGATCTTCTTGTCGAAGCTGTGAGTTACAGAAGAATTTTTATTGAACAACGTATGGCTTTTATTGAATTTGATGCAAAGATTGGAGAAATGGACGCCAACCTGAAGCAGCATGACAATTTGGCTGTGCAAGCATCATTGCACTTTGAAAACTGTAAGAAAGAATCTGAGAATTGTAGACAGAAGCTTACAGATTCCTTGAAGTATGCTAAATCAATTGCTCAGCTTACATCTGAGCTAAAGAAGGAATTTCTCGAGATGCCTACTACAATTGAGGAACTGGAGGCAGCTATCCAGGATACCACTTCTCAAGCCAATTCAATTCTCTTTGTCAATCATAACATATTGGAACAATATAAAGATCGTCAACGGCAGATAGAAGATCTTGCAGCAAAACTGGAAGCAGACAAAAAGGAATCTACACGGTGTTTGGCTGAATTAAATAACATTAAGGGAAAATGGCTTCCTACATTGAGAAACCTTGTGGTAAAAATAAATGAAACTTTCAGTTATAATTTCCAAGAGATGGCAGTTGCTGGAGAAGTTTCGCTAGATGAGCATGATATAGATTTTGATCAATTTGGAATACTGATAAAAGTTAAATTCAGAGAAAATGGACAACTTAATGTTTTGAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTGACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAATTAGTGCGAGCAGCAAGCAAGCCAAATACACCCCAGTGTTTCTTACTTACCCCAAAATTGTTACCAGATCTGCAATATAGTGAAGCATGCAGTATATTGAATGTGATGAATGGCCCTTGGATTGAGCAACCCTCGAAGGTCTGGACTACTGGTGATCGATGGAGTATTATCACAGGGCTTGTTGGAAACACCCCTTGCTAA 3162 0.3994 MSESRPPKRPKITRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEEHISIMRKISTNNKSEWLFNGNVVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVELLEETEKAVGDPQLPEQHRTLIDKSRSLKHLELSLEKNEGTLKQLKERNAELETDVERVRQREELLAKVEAMKKKLPWLRYDMKQAEYREAKERENDAAKALEEAAKLLNDLKEPVMKHKEEKAAIDAKCKKVNRNINENSKKRNELMEEENKLDVELQGKYKEMEELRRQEETRQQKLVKAREELAIAEHELENLPSYVPPKDELQRLRAEIGELDYSANQVRQNKSQAENEIKRKKSFMMQNKERLMEMNNKSTKCLHVLQRSGAEKIIEAYKWVQEHRHEFNKEVYGPVLVEVNVSNKVHAAYLEGQVAHYTWKSFITQDSGDRDLLVKHLQFFDVPVLNYTGGDDGHQREPFENSEDKRALGIYSRLDQIFDAPIAVKEVLISQFNLDYSYIGSNETDQNADEVPKLGITDLWTPENHYRWSKSRYGSHVSTVVQQVERPQLLVNNLDVGEIEKLRSQQKELEEVVANLEECVKKFQDEERSLVNQAANLRKQWEGISITVQNEHRNRQTLISRIDQRKGYLKVMEERDDLDTEIAKLVHQASKYNIQRFHNAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIGEMDANLKQHDNLAVQASLHFENCKKESENCRQKLTDSLKYAKSIAQLTSELKKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNILEQYKDRQRQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVVKINETFSYNFQEMAVAGEVSLDEHDIDFDQFGILIKVKFRENGQLNVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDRWSIITGLVGNTPC* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04298 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1045 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Phac2g04298 1053 FunFam Structural maintenance of chromosomes 5 849 1020 - -
Phac2g04298 1053 Coils Coil 622 663 - -
Phac2g04298 1053 Pfam RecF/RecN/SMC N terminal domain 25 994 IPR003395 -
Phac2g04298 1053 Gene3D - 847 1008 IPR027417 -
Phac2g04298 1053 Coils Coil 194 228 - -
Phac2g04298 1053 Gene3D - 23 219 IPR027417 -
Phac2g04298 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 1004 IPR027417 -
Phac2g04298 1053 Coils Coil 842 876 - -
Phac2g04298 1053 Coils Coil 296 358 - -
Phac2g04298 1053 Coils Coil 251 278 - -
Phac2g04298 1053 Coils Coil 372 392 - -
Phac2g04298 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04298 Phac-Chr2 41436035 41455681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04298 1 1042 Structural Maintenance of Chromosomes family AT5G15920 62.284 0.0 1295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04298 K22803 - gmx:100778678 1855.11