LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g04287	ATGAACCAACATCTTTCTATATATAACAACACCAACCTTAACTTCCACAAATTCATCAATCAATCTCTCCCCACCCCAATATTCCATATCTACCATGTTCTTCTTACTCTTTGTATAAAACACAAGTTCGGCACTTTTCTCGTACCTCACACAGTAAATTTACTGTGTTTCTGTGTATATATACAGAAAGAGTTTAAGAGTAAGAAAATGGAGTTTGTGAAGAAGTGGAAGAGAGTATTGGAAAGCGGGAAGAGATTGCATGGGGAGAGCAGTTTAAGTGGAAGGTATGGGAGGTTGAAAAACAAAGAACGGCAACAGAGGAAGAAGCCTTGTGTGGCTCCACATGGTTGTCTCTGTGTGTACGTTGGAGCCGAGAGAGAGAGATTCATAGTAAAGATAAAGATAGCGAATCACCCTTTGTTCAAAGAGCTTTTGGACGGTACTGAGAGAGAATATGGGTATAGAAACGATGGTCCCTTGTGGCTCCCTTGTCACGTTGACTTCTTCTGTGAGGCACTGACGGAGATGGAGATCAGCACCACCCAAGAACATGTAGGTTGCGTGGGTCATAGTTACAGTCACATCTCATCTTCTTCAGTTTGTGATCTCAGTTGTAGATATGCGACAGGGTCTTCCTCTGATCGTTATTGTGAAACCCTTGTGAATTGA	669	0.42	MNQHLSIYNNTNLNFHKFINQSLPTPIFHIYHVLLTLCIKHKFGTFLVPHTVNLLCFCVYIQKEFKSKKMEFVKKWKRVLESGKRLHGESSLSGRYGRLKNKERQQRKKPCVAPHGCLCVYVGAERERFIVKIKIANHPLFKELLDGTEREYGYRNDGPLWLPCHVDFFCEALTEMEISTTQEHVGCVGHSYSHISSSSVCDLSCRYATGSSSDRYCETLVN*	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g04287	222	PANTHER	AUXIN-INDUCED PROTEIN-LIKE-RELATED	100	171	IPR003676	GO:0009733
	Phac2g04287	222	Pfam	Auxin responsive protein	74	173	IPR003676	GO:0009733

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g04287	Phac-Chr2	41342101	41342881	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g04287	105	169	Calmodulin-binding Proteins	AT3G43120	44.615	2.07e-12	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g04287	K14488		-	gmx:102667331	152.525