Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04275 ATGGAAAAGCTGAATTTTGTTAAAAATGGAGTGAGCAAATTGCCTCCTGGTTTTCGTTTTCAGCCAACAGATGAAGAACTTGTTTTCCAATACCTCAAGTGTAAGGTCTTCTCCTATCCCTTGCCTGCTTCTATCATCCCTGAGATCAATGTCTGCAAGCATGATCCTTGGGATTTACCAGGGAATTGTGATCCACAAGAGAGGTATTTTTTCAGTCCGAAGGAAGCAAAGTATAGAAATGGTAATCGCATGAACAGAACAACAAAGTGTGGATATTGGAAGGCAACAGGGTCAGACAAGAGAATTTCATCATCTTCAAATGCTTGTAATGGCATTGTGGGGATAAGAAAAACACTGATTTTTTATGAAGGAAAATCTCCAAAAGGCTCCAGAACTGATTGGGTCTTGCATGAATATCGTCTTGTTAATGCAGAAACTGGTGCTTGCAACTCATCCCATAACTACGTAAACGAGATTGGAGATTGGGTTTTGTGTCGCTTATCGATGAAGAAAAGAAGTATAGAAAGTGGTGTTGATGAGAAGCAAAGAGTTCATAATGGACCAAGATTAATGTTTGATTTTATGATGTTAGGAAAAACCGATTCTTCTACATCCTCATCGTGTTCAAGTTCTAATAACATTATCGAAGTCTCTTCAAATGCATCGGATCATGAAGAAACAAGTGGTGGCTATGCCTACTTTTAG 705 0.3872 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKHDPWDLPGNCDPQERYFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSSNACNGIVGIRKTLIFYEGKSPKGSRTDWVLHEYRLVNAETGACNSSHNYVNEIGDWVLCRLSMKKRSIESGVDEKQRVHNGPRLMFDFMMLGKTDSSTSSSCSSSNNIIEVSSNASDHEETSGGYAYF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04275 234 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Phac2g04275 234 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Phac2g04275 234 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Phac2g04275 234 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 200 - -
Phac2g04275 234 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04275 Phac-Chr2 41213854 41215275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04275 1 173 NAC Transcription Factor Family AT5G13180 61.272 6.59e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g04275 NAM 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04275 - - gmx:100812015 410.994