Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04272 ATGGGTTGCGCCCTTCGGAAGCCGGCGGATTCTGTCGACTGTCGTCGGCATAAAACCGCCACTGCTGGCGGCGGAAATAATGCCGTTAAGATTCAGGAGAAGCAGGAGGCTCTGGCGCCGGAGCGCCGGAGACCTCGACTTGACTCATTCATCACGAGCCACCAAGGGTGGCCGCCGTGGCTGGTGGTCGTCGCCGGCGACGCACTTGGAGACTGGACTCCTCGCCGTGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAAGCAAGGGACCTTGTAACTGGGAAAATAGTGGCTTTGAAGAAGGTTAGATTTGACAATTTGGAGGCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGAGGCTTGATCACCCCAATGTTGTGAAGCTTGAGGGGTTGGTTACTTCAAGAATATCATCCAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTGCTGGTCTTGCAGCTGGTGTGGGTTTCAAATTCTCTGAGCCACAGATCAAATGTTATATGAAGCAATTGCTATCTGGCCTTGAGCATTGCCACAGCAGAGGTGTTCTGCACCGTGATATTAAGGGTTCCAATCTGCTCATTGACAACGAAGGAATACTTAAAATTGCAGATTTTGGATTGGCAACTTTCTATGATCCTAAGCAAAAACATCCTATGACCAGTAGAGTTGTGACCCTTTGGTACCGTCCTCCTGAGCTTCTTCTGGGGGCTACATCATATGGCGTTGGTGTCGACCTTTGGAGTGCTGGCTGCATTTTGGCAGAGCTGCTTTCTGGAAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAGCTGCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCTTATAAAAGAAACATCTTAGAAACATTCAAGGATCTCCCTTCTTCTTCATTACCTCTGATTGAAACTCTTCTTGCAATAGATCCTAATGATCGTGGCACTACCTCCTCTGCTCTAAATAGTGAGTTCTTTACCACTGAGCCCTATACTTGTGAACCATCTAGTTTGCCAAAGTATCCTCCTACCAAAGAATTGGATATAAAATTGAGAGATGAAGAAGCAAGAAGGCAAAAGGCTCTAAGTGGAAAAAACAATGCAGTTGATGGTGCCAAAAGGGTTAGAGTACGCGAGCGTAGTTTGGCCATTCCAGCCCCGGAAGCCAATGCAGAGATCCAAGCAAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGTAAGAGTGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCACTGGATGCATCAAATAAAGGAGCTGTTTCATTTGGAGCCACCGAAACTTCCACAGCCTCTACCATATTTGATTCAAAACCTTCTGGATCTGTTATAAGTCATGATCCTGCCATAGACAAAGTGAGGAGAAGTAATACTGCAGACTCCCAGATGGCTACATCTTGGAAATTTTTGCGTTCATTCAAGCTATCAACAATTGGTCATTCATTTGATTTATTATTTAGAAGCAATTAA 1629 0.453 MGCALRKPADSVDCRRHKTATAGGGNNAVKIQEKQEALAPERRRPRLDSFITSHQGWPPWLVVVAGDALGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEAESVKFMAREILVLRRLDHPNVVKLEGLVTSRISSSLYLVFEYMEHDLAGLAAGVGFKFSEPQIKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPKQKHPMTSRVVTLWYRPPELLLGATSYGVGVDLWSAGCILAELLSGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRNILETFKDLPSSSLPLIETLLAIDPNDRGTTSSALNSEFFTTEPYTCEPSSLPKYPPTKELDIKLRDEEARRQKALSGKNNAVDGAKRVRVRERSLAIPAPEANAEIQANLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASNKGAVSFGATETSTASTIFDSKPSGSVISHDPAIDKVRRSNTADSQMATSWKFLRSFKLSTIGHSFDLLFRSN* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04272 542 SMART serkin_6 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04272 542 CDD STKc_CDK9_like 80 364 - -
Phac2g04272 542 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04272 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Phac2g04272 542 FunFam probable serine/threonine-protein kinase At1g54610 163 404 - -
Phac2g04272 542 Gene3D Phosphorylase Kinase; domain 1 67 162 - -
Phac2g04272 542 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Phac2g04272 542 FunFam probable serine/threonine-protein kinase At1g54610 67 162 - -
Phac2g04272 542 SUPERFAMILY Protein kinase-like (PK-like) 74 369 IPR011009 -
Phac2g04272 542 Pfam Protein kinase domain 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04272 542 PANTHER CELL DIVISION PROTEIN KINASE 78 368 - -
Phac2g04272 542 Gene3D Transferase(Phosphotransferase) domain 1 163 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04272 Phac-Chr2 41193743 41198779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04272 72 398 Core Cell Cycle Gene Families AT5G10270 50.857 4.96e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac2g04272 Pkinase 5.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04272 K08819 - gmx:100789359 972.615