Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04257 ATGAAGAACTTGCCCACATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAATTGAGCTTTTGCTTGGAGATTTTCTGTCTCTCTAATCATGCAGATAGAATTGTTCGGCTTCCAGGGCAACCCAACACAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACCTCAAACACAAAGCTCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATTAAAAACGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGGGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATTCAGGAACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATACGCCACTGACTTGAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCTGATTCAACGTACAAATTGTTTACTACAGGTTGTAATTATTCCCGGTACGTCAGTGAATACTATAGAGACTCGATTTCGCCGCTTTGTTCAAAGGTTTTGAGGCATGTAGCCAGAGAAACCAGTAGGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAGTCAGTTTTCTCTCATTTTTCTTGTGTGGATGTTTCCTATATCAGTGTTTAGCTATTATACTTCAAGCAATTTTGTTTTTTACATTGGCTTGTTCATTACCTCTTGCCAAACAGAAAATAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCGCTCCATGCCAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAACAACAGCATTTTGGACTATGATATGCTCAACCTGGAGAAACCTACACTTCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGCCGCACCTTAGTTCAAAAGCTGGCTAGACAACTAGGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCGTTTGTTTTGTTCAAGTCATTCGTGGAAGATAGGCCTCTACCTGAAATTTTCTGA 1521 0.4214 MKNLPTWKTMAMTVVLLQLSFCLEIFCLSNHADRIVRLPGQPNTGFQQFSGYVTVDDLKHKALFYYFVESETHPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQFRNRDLFLAGESYAGHYVPQLAKLMIEINKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVLRHVARETSRFVDKYDVTLDVCISSVLSQSKAICPQGQVSFLSFFLCGCFLYQCLAIILQAILFFTLACSLPLAKQKINESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNNSILDYDMLNLEKPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFVEDRPLPEIF* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04257 506 Gene3D - 400 498 - -
Phac2g04257 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 486 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 FunFam Carboxypeptidase 400 499 - -
Phac2g04257 506 SUPERFAMILY alpha/beta-Hydrolases 37 503 IPR029058 -
Phac2g04257 506 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Phac2g04257 506 ProSitePatterns Serine carboxypeptidases, histidine active site. 469 486 IPR033124 GO:0004185
Phac2g04257 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 Pfam Serine carboxypeptidase 42 498 IPR001563 GO:0004185|GO:0006508
Phac2g04257 506 Gene3D alpha/beta hydrolase 28 310 IPR029058 -
Phac2g04257 506 Gene3D - 352 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04257 Phac-Chr2 41124694 41128989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04257 360 502 Calmodulin-binding Proteins AT2G22960 28.671 9.50e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04257 K16297 - gmx:100800002 865.144