Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04255 ATGTTGTATTTGGAGACACCAGTTGGGGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATTCAGGAACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATACGCCACTGACTTGAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCTGATTCAACGTACAAATTGTTTACTACAGGTTGTAATTATTCCCGGTACGTCAGTGAATACTATAGAGACTCGATTTCGCCGCTTTGTTCAAAGGTTTTGAGGCATGTAGCCAGAGAAACCAGTAGGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAAAAATAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCGCTCCATGCCAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAACAACAGCATTTTGGACTATGATATGCTCAACCTGGAGAAACCTACACTTCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGCCGCACCTTAGTTCAAAAGCTGGCTAGACAACTAGGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCGTTTGTTTTGTTCAAGTCATTCGTGGAAGATAGGCCTCTACCTGAAATTTTCTGA 1041 0.4275 MLYLETPVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQFRNRDLFLAGESYAGHYVPQLAKLMIEINKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVLRHVARETSRFVDKYDVTLDVCISSVLSQSKAICPQGQKINESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNNSILDYDMLNLEKPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFVEDRPLPEIF* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04255 346 ProSitePatterns Serine carboxypeptidases, serine active site. 54 61 IPR018202 GO:0004185
Phac2g04255 346 PRINTS Carboxypeptidase C serine protease (S10) family signature 4 14 IPR001563 GO:0004185|GO:0006508
Phac2g04255 346 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 65 IPR001563 GO:0004185|GO:0006508
Phac2g04255 346 PRINTS Carboxypeptidase C serine protease (S10) family signature 309 322 IPR001563 GO:0004185|GO:0006508
Phac2g04255 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Phac2g04255 346 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 326 IPR001563 GO:0004185|GO:0006508
Phac2g04255 346 FunFam Carboxypeptidase 240 339 - -
Phac2g04255 346 Pfam Serine carboxypeptidase 1 338 IPR001563 GO:0004185|GO:0006508
Phac2g04255 346 SUPERFAMILY alpha/beta-Hydrolases 1 343 IPR029058 -
Phac2g04255 346 ProSitePatterns Serine carboxypeptidases, histidine active site. 309 326 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04255 Phac-Chr2 41124694 41128989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04255 200 342 Calmodulin-binding Proteins AT2G22960 28.671 5.49e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04255 K16297 - gmx:100800002 646.736