Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04249 ATGGCGTCGTCGGAGGTATCAATCAAGGGAAATTTGGTGAACGGAAAAGGAGAAAACAGTTCCGGTGGCTTCAACAACGGCAACGATGTTAGGAACGCTGGAGGAGAGCCTCAGAATGGTTCTTCTTCGTCATCCGCCAGAGACGCGGAGACAGCGCTTTACCGGGAGCTTTGGCACGCGTGCGCGGGTCCGCTGGTGACGGTACCTAGAGAAGGAGAGCGCGTGTTCTACTTTCCTCAAGGACATATAGAGCAGGTGGAAGCGTCGACAAATCAGGTAGCGGAACAGCATATGCCGGTTTACGATCTACCACCGAAGATCCTTTGTCGGGTCATCAACGTCATGCTCAAGGCGGAGCCAGACACAGACGAGGTGTTTGCTCAAGTGACCTTGCTTCCTGAGCCAAATCAAGACGAAAATGCGGTGGAGAAGGAGGGTCCTCCGGCACCGCCTCCTCGGTTTCACGTGCATTCGTTTTGTAAAACGCTGACGGCTTCTGATACGAGTACTCACGGTGGATTTTCGGTGTTGAGACGACATGCTGATGAATGCCTCCCTCCGCTGGACATGTCAAAGCAGCCACCTACCCAGGAGTTGGTGGCCAAGGATCTACACGGGAACGAGTGGCGATTCAGGCATATTTTTCGGGGTCAACCGCGTAGACACTTGCTGCAAAGCGGATGGAGTGTTTTTGTGAGCTCCAAGAGGCTGGTTGCTGGGGATGCGTTTATATTTTTAAGGGGTGAGAATGGGGAACTTCGAGTTGGTGTTAGGCGTGCAATGAGGCAGCAGGGTAACGTTCCGTCCTCGGTTATCTCGAGCCACAGTATGCATCTTGGTGTTCTCGCAACTGCTTGGCATGCCATATTGACTGGAACCATGTTCACCGTGTATTACAAACCTAGGACTAGTCCAGCTGAATTTATAGTTCCGTATGATCAGTACATGGAGTCTCTAAAAAACAATTACACCATCGGGATGCGGTTCAAAATGAGATTTGAAGGTGAAGAGGCTCCCGAGCAAAGGTTTACCGGTACCATTGTTGGAATTGAAGATGCTGATCCCAAAAGGTGGCCTAACTCCAAATGGAGAAGTCTTAAGGTGAGATGGGATGAAACTTCTAACGTACCTCGTCCTGAGAGAGTTTCCCAATGGAAAATAGAGCCGGCCCTCGCTCCTCCTGCTCTTAACCCTTTACCAATGCCCAGGCCTAAGAGGCCTCGATCTAATGTGGTTCCATCATCCCCAGATTCCTCTGTTCTTACCCGTGAAGCATCGTCTAAAGTGAGTGTAGACCCTTTGCCAGCTAGTGGGTTTCAAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGTAAATTTTGCCGAAAGCAATGAATCTGATACGGCTGAGAAGTCTGCGTGGTCATCTGCTGCAGATGACGAAAAGATTGATGTTGTTTCCACCTCAAGAAGGTATGGATCAGAGAGCTGGATGTCAATGGGAAGGCATGAACCAACATATCCAGATCTACTTTCTGGCTTTGGGGTCCATGGAGATCAATCTTCCCATCCATCATTTGTTGATCAAAATGGTCCTGTAGCTAACCTTAGTAGAAAACATTTTTTGGACCGCGAAGGCAAACATAATGTTCTTAGTCCATGGCCCAGTCTACCACTCAATCTCTTGGACTCTAATACAAAAGCCTCTGCTCAAGGTGGTGATACAACTTGTCAAGTTCGAGGGAATTTGAGGTTTAGCAGTGCATTTGGTGACTATACTGTGCTTCATGGGCACAAAGTTGAGCATTCACATGGAAACTTTTTGATGCCTCCTCCACTGTCAACTCAATATGAGAGTCCTCGTTCTAGAGAACTGTTACCCAAACCAATATCAGGAAAACCTTCTGAGGTGTCAAAACCGAAGGACAGTGACTGTAAGCTATTTGGCATCTCACTTCTTAGTAGCCCCATTGTTCTGGACCCTTCTGTATCACAAAGGAATGTTGCAATTGAGCCAGTTGGTCACATGCATAACCAACAGCACACATTTGAAAATGACACGAAGTCTGAGAATTCAAGGGGATTGAAACCGGCTGATGGTCTGCTGATTGACGACCATGAAAAGCTGTCGCAAAATTCTCAGCCACATCTGAAAGATGTTCAACCCAAATCTAATAGTGGTTCTGCTAGAAGTTGCACTAAAGTTCACAAGAAAGGGATTGCACTTGGTAGGTCGGTAGACCTCACAAAATTCAGTGCGTATGATGAGTTAATCGCTGAATTGGATCAGCTATTTGAATTTGGAGGTGAATTAACCTCTCCCCAAAAAGATTGGCTTATTGTCTACACTGACAATGAAGGCGATATGATGCTTGTTGGTGATGATCCGTGGCAGGAATTTGTTGCTATGGTACGCAAAATTTATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCGGGTACCTTGAGTTCAAAGAATGAAGAGAATCAATCGGTTAGTGAAGGTGTAGAGGCACAAGAAATTAAATGTCAGCTGAATCATTCAGCTTCAGAGGCCTGA 2547 0.47 MASSEVSIKGNLVNGKGENSSGGFNNGNDVRNAGGEPQNGSSSSSARDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPNSKWRSLKVRWDETSNVPRPERVSQWKIEPALAPPALNPLPMPRPKRPRSNVVPSSPDSSVLTREASSKVSVDPLPASGFQRVLQGQELSTLRVNFAESNESDTAEKSAWSSAADDEKIDVVSTSRRYGSESWMSMGRHEPTYPDLLSGFGVHGDQSSHPSFVDQNGPVANLSRKHFLDREGKHNVLSPWPSLPLNLLDSNTKASAQGGDTTCQVRGNLRFSSAFGDYTVLHGHKVEHSHGNFLMPPPLSTQYESPRSRELLPKPISGKPSEVSKPKDSDCKLFGISLLSSPIVLDPSVSQRNVAIEPVGHMHNQQHTFENDTKSENSRGLKPADGLLIDDHEKLSQNSQPHLKDVQPKSNSGSARSCTKVHKKGIALGRSVDLTKFSAYDELIAELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSVSEGVEAQEIKCQLNHSASEA* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04249 848 Gene3D - 322 392 - -
Phac2g04249 848 Gene3D - 156 261 IPR015300 -
Phac2g04249 848 MobiDBLite consensus disorder prediction 707 727 - -
Phac2g04249 848 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 814 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac2g04249 848 Gene3D - 721 814 - -
Phac2g04249 848 Pfam Auxin response factor 285 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac2g04249 848 MobiDBLite consensus disorder prediction 709 727 - -
Phac2g04249 848 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
Phac2g04249 848 MobiDBLite consensus disorder prediction 601 636 - -
Phac2g04249 848 FunFam Auxin response factor 322 394 - -
Phac2g04249 848 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Phac2g04249 848 MobiDBLite consensus disorder prediction 411 426 - -
Phac2g04249 848 CDD B3_DNA 157 259 IPR003340 GO:0003677
Phac2g04249 848 Pfam AUX/IAA family 771 813 IPR033389 -
Phac2g04249 848 MobiDBLite consensus disorder prediction 392 432 - -
Phac2g04249 848 MobiDBLite consensus disorder prediction 393 409 - -
Phac2g04249 848 SUPERFAMILY CAD & PB1 domains 726 802 - -
Phac2g04249 848 ProSiteProfiles PB1 domain profile. 725 807 IPR000270 GO:0005515
Phac2g04249 848 FunFam Auxin response factor 720 814 - -
Phac2g04249 848 SUPERFAMILY DNA-binding pseudobarrel domain 155 288 IPR015300 -
Phac2g04249 848 MobiDBLite consensus disorder prediction 813 848 - -
Phac2g04249 848 MobiDBLite consensus disorder prediction 1 48 - -
Phac2g04249 848 SMART B3_2 159 261 IPR003340 GO:0003677
Phac2g04249 848 FunFam Auxin response factor 157 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04249 Phac-Chr2 41080263 41086075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04249 1 848 B3 DNA Binding Superfamily AT5G62000 64.719 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac2g04249 AUX_IAA 1.7e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04249 - - gmx:100815956 1476.46