Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04247 ATGTCACTGAGAAAAAGTACTAAGATTGACATTGCCACTGTCATTAAAGAGGAACTGCAGGAAGCAAGAGCATCATTTGAGGAAGCCCGATTCAATTTGGTTGCCACTCTTAATAACGTTGAGGTGAAGAAGAGATTCGAGTTTTTAGAGGCTGTAACCAGAATTATGGATGCTCATTTTCGATACTTTCAACAGGGGTATCAGCTATTGAATCAGATGGAACCTTTCATTAATGAGATTATGGATTATGTACATCAGTCAAGAGAAAATTACAATAGCGAGCAGATTCAACTTTATCAAAGGATGCAAGACTACAAGAAACAAGCTTATGAAGAAAGTAGGTTTTCCTTGAGTGGTCCTTACGGTTCTCCTCGTGTAGACTTTGCACATCCATTTTCTAGGATATCAAATGAGGTGGCAGATATAGTAATGGAATCTGCTGCAAATGGAAAGGTTCAAATCATTCGGCAAGGATATCTTTCAAAACGATCCTCCAATTTGAGAGCTGATTGGAAAAGAAGGTATTTTGTTCTCGACAGTCGAGGAATGTTGTACTACTACCGCAAACCATGGAGCGGGTCATATGGCAGCAATCAACCATCTCCAAAGAGGAATAGTGGCACTGAAAATGGTTCTGGAATTCTAAGTCGTTGGCTTTCTTCTCATTACCATGGAGGTGTCTATGATGAAAGATCTATTGCACGTCATACAGTGAACCTGCTGACATCAAAAATCAAGGTTGATGCTGATCAGTCAGATTTGAGATTCTGCTTCAGGATTATTTCGCCATCAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATGCAAAAGATAAATGGAGTAATTGCCAGCTTGTTGAATGTCCAGTCACTGGAAACGCCTCTCTCAGCTGACTCAGAAAACGGCAACTCTCGCTCTGATGACAATATTGATAAGTTAGGAAGTTATCCAGATGATGATCATGCTTTGAGAGTGGAGTCTCCATTCAATAATTCCACTCGTAATAACCACTTAAGTTTGTCTAAAAGTATGTACATACATACACACAGTATGAGAATTCAAAAGCCAATTGATGTTCTTAGAAGTGTGAGCGGAAATGATAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTAAACCTTGGCATCCTTATATGCATTGAGTGCTCTGGTGTTCATCGTAATCTTGGTGTACATGTATCAAAAGTGAGATCGCTGACACTTGATGTTAAAGTTTGGGATTCCTCTGTCTTAAGTATGCTTAAATCTCTTGGCAATCTTTTTGCAAACTCAGTTTGGGAGGAGTTGTTGCATTCAGGGGGTAATTTGCAAACTGATGACACCCTTGCTAGTTCATCCAAGGAAACGGGAGAGGAGATCTTCCATGCAAGAAAGCCAAAACATGACGATCCTATTTTGTTAAAGGAAAGGTTCATTCACGCAAAGTACTGTGAGAAAACATTTATTCAGCGGATCACGAAAAGCCACCCTATCCATTCACTAGAGCAACAGGTGCAGGAAAGCATCTGTGCAAATGACAAGAAAGCAGTGTACCAGCTTATTCTTAAGTCGGATGTTGACCTCAATGCCATCCGTTGGCAATCATTGTCTGGTGACTCTTTCAACATGGCATCTGAAAGCGAAAATGAGGTCGTTGAGGACGTGAAAGATGGCTCTAGCGTGCTTCACTTGGCTTGCCTAACTGGTGACATTGGCATGGTGGAGCTACTCCTACAGCTTGGGGCAGATATAAATGCTTCTGATTCTAGAGGTCGGACACCACTTCATTGTTGTATTCTTAGAGGACAGACTGCAGCTGCAAAATCGCTTATCTTGAGGGGAGCCAATATATATATCGCAGATAAAGAAGGCAACACTCCTGTGAAGCTTGCATCAGAATCCGGCTGTTTTGACACTGAAATTATAAAACTCTTGACAAGCAGATAA 1974 0.4113 MSLRKSTKIDIATVIKEELQEARASFEEARFNLVATLNNVEVKKRFEFLEAVTRIMDAHFRYFQQGYQLLNQMEPFINEIMDYVHQSRENYNSEQIQLYQRMQDYKKQAYEESRFSLSGPYGSPRVDFAHPFSRISNEVADIVMESAANGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPWSGSYGSNQPSPKRNSGTENGSGILSRWLSSHYHGGVYDERSIARHTVNLLTSKIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMQKINGVIASLLNVQSLETPLSADSENGNSRSDDNIDKLGSYPDDDHALRVESPFNNSTRNNHLSLSKSMYIHTHSMRIQKPIDVLRSVSGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHVSKVRSLTLDVKVWDSSVLSMLKSLGNLFANSVWEELLHSGGNLQTDDTLASSSKETGEEIFHARKPKHDDPILLKERFIHAKYCEKTFIQRITKSHPIHSLEQQVQESICANDKKAVYQLILKSDVDLNAIRWQSLSGDSFNMASESENEVVEDVKDGSSVLHLACLTGDIGMVELLLQLGADINASDSRGRTPLHCCILRGQTAAAKSLILRGANIYIADKEGNTPVKLASESGCFDTEIIKLLTSR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04247 657 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Phac2g04247 657 ProSiteProfiles ARF GTPase-activating proteins domain profile. 360 505 IPR001164 GO:0005096
Phac2g04247 657 Coils Coil 88 108 - -
Phac2g04247 657 ProSiteProfiles PH domain profile. 153 289 IPR001849 -
Phac2g04247 657 ProSiteProfiles Ankyrin repeat region circular profile. 599 631 - -
Phac2g04247 657 Pfam Putative GTPase activating protein for Arf 363 499 IPR001164 GO:0005096
Phac2g04247 657 SUPERFAMILY PH domain-like 154 306 - -
Phac2g04247 657 PRINTS HIV Rev interacting protein signature 391 408 IPR001164 GO:0005096
Phac2g04247 657 PRINTS HIV Rev interacting protein signature 372 391 IPR001164 GO:0005096
Phac2g04247 657 PRINTS HIV Rev interacting protein signature 414 435 IPR001164 GO:0005096
Phac2g04247 657 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Phac2g04247 657 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 343 506 - -
Phac2g04247 657 PANTHER CENTAURIN/ARF 1 655 IPR045258 GO:0005096
Phac2g04247 657 Gene3D Arfaptin homology (AH) domain/BAR domain 1 111 IPR027267 -
Phac2g04247 657 Gene3D - 146 300 IPR011993 -
Phac2g04247 657 Pfam PH domain 155 288 IPR001849 -
Phac2g04247 657 SMART arf_gap_3 360 505 IPR001164 GO:0005096
Phac2g04247 657 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Phac2g04247 657 Pfam BAR domain of APPL family 13 94 IPR004148 GO:0005515|GO:0005737
Phac2g04247 657 Pfam Ankyrin repeats (many copies) 568 619 IPR002110 GO:0005515
Phac2g04247 657 CDD ArfGap 363 492 - -
Phac2g04247 657 Gene3D - 515 657 IPR036770 -
Phac2g04247 657 CDD PH_ACAP 156 293 - -
Phac2g04247 657 MobiDBLite consensus disorder prediction 300 319 - -
Phac2g04247 657 SUPERFAMILY ArfGap/RecO-like zinc finger 359 499 IPR037278 -
Phac2g04247 657 SUPERFAMILY Ankyrin repeat 519 655 IPR036770 -
Phac2g04247 657 SUPERFAMILY BAR/IMD domain-like 14 176 IPR027267 -
Phac2g04247 657 SMART ANK_2a 599 628 IPR002110 GO:0005515
Phac2g04247 657 SMART ANK_2a 566 595 IPR002110 GO:0005515
Phac2g04247 657 SMART PH_update 154 291 IPR001849 -
Phac2g04247 657 Gene3D Arf GTPase activating protein 341 505 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04247 Phac-Chr2 41048099 41061705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04247 366 502 C2H2 Transcription Factor Family AT4G21160 39.716 2.46e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04247 K12489 - gmx:100792517 1037.71