Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04245 ATGCATTTCGCGAATCTCGATGACACTCCGATGTTCCGCCAACAGATGCAGTATTTGGAGGAAGGTGCAGAATCGTTGCGCGCGAGGTGCTGCAAGTTCTATAAAGGATGTCGAAAGTACACGGAAGGTCTTGGAGAGGCATGTGATGGGGACATCGCATTTGCAAGTGCCATAGAAAACTTTGGAGGAGGGCCCAATGATCCTCATTTTATTGCTTTAGGAGGACATATTATGACCAAATTTACTATAGCATTGAGAGAAATCAGTACATTCAAGGAACTGCTCCGGTTACAAGTAGAGTACATTTTCAATCGTCGGTTACAACCCATTGTCAGTGTTGACATCCATGAAGTCAAGGAAGCTCGTAAGCGTTTTGATAAATCCTCCCTAGTATACGATCAGGCGCGTGAAAAATTTATGTCACTGAGAAAAAGTACTAAGATTGACATTGCCACTGTCATTAAAGAGGAACTGCAGGAAGCAAGAGCATCATTTGAGGAAGCCCGATTCAATTTGGTTGCCACTCTTAATAACGTTGAGGTGAAGAAGAGATTCGAGTTTTTAGAGGCTGTAACCAGAATTATGGATGCTCATTTTCGATACTTTCAACAGGGGTATCAGCTATTGAATCAGATGGAACCTTTCATTAATGAGATTATGGATTATGTACATCAGTCAAGAGAAAATTACAATAGCGAGCAGATTCAACTTTATCAAAGGATGCAAGACTACAAGAAACAAGCTTATGAAGAAAGTAGGTTTTCCTTGAGTGGTCCTTACGGTTCTCCTCGTGTAGACTTTGCACATCCATTTTCTAGGATATCAAATGAGGTGGCAGATATAGTAATGGAATCTGCTGCAAATGGAAAGGTTCAAATCATTCGGCAAGGATATCTTTCAAAACGATCCTCCAATTTGAGAGCTGATTGGAAAAGAAGGTATTTTGTTCTCGACAGTCGAGGAATGTTGTACTACTACCGCAAACCATGGAGCGGGTCATATGGCAGCAATCAACCATCTCCAAAGAGGAATAGTGGCACTGAAAATGGTTCTGGAATTCTAAGTCGTTGGCTTTCTTCTCATTACCATGGAGGTGTCTATGATGAAAGATCTATTGCACGTCATACAGTGAACCTGCTGACATCAAAAATCAAGGTTGATGCTGATCAGTCAGATTTGAGATTCTGCTTCAGGATTATTTCGCCATCAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATGCAAAAGATAAATGGAGTAATTGCCAGCTTGTTGAATGTCCAGTCACTGGAAACGCCTCTCTCAGCTGACTCAGAAAACGGCAACTCTCGCTCTGATGACAATATTGATAAGTTAGGAAGTTATCCAGATGATGATCATGCTTTGAGAGTGGAGTCTCCATTCAATAATTCCACTCGTAATAACCACTTAAGTTTGTCTAAAAGTATGTACATACATACACACAGTATGAGAATTCAAAAGCCAATTGATGTTCTTAGAAGTGTGAGCGGAAATGATAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTAAACCTTGGCATCCTTATATGCATTGAGTGCTCTGGTGTTCATCGTAATCTTGGTGTACATGTATCAAAAGTGAGATCGCTGACACTTGATGTTAAAGTTTGGGATTCCTCTGTCTTAAGTATGCTTAAATCTCTTGGCAATCTTTTTGCAAACTCAGTTTGGGAGGAGTTGTTGCATTCAGGGGGTAATTTGCAAACTGATGACACCCTTGCTAGGTAA 1800 0.4089 MHFANLDDTPMFRQQMQYLEEGAESLRARCCKFYKGCRKYTEGLGEACDGDIAFASAIENFGGGPNDPHFIALGGHIMTKFTIALREISTFKELLRLQVEYIFNRRLQPIVSVDIHEVKEARKRFDKSSLVYDQAREKFMSLRKSTKIDIATVIKEELQEARASFEEARFNLVATLNNVEVKKRFEFLEAVTRIMDAHFRYFQQGYQLLNQMEPFINEIMDYVHQSRENYNSEQIQLYQRMQDYKKQAYEESRFSLSGPYGSPRVDFAHPFSRISNEVADIVMESAANGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPWSGSYGSNQPSPKRNSGTENGSGILSRWLSSHYHGGVYDERSIARHTVNLLTSKIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMQKINGVIASLLNVQSLETPLSADSENGNSRSDDNIDKLGSYPDDDHALRVESPFNNSTRNNHLSLSKSMYIHTHSMRIQKPIDVLRSVSGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHVSKVRSLTLDVKVWDSSVLSMLKSLGNLFANSVWEELLHSGGNLQTDDTLAR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04245 599 SUPERFAMILY PH domain-like 293 445 - -
Phac2g04245 599 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Phac2g04245 599 SMART 5bar 11 218 IPR004148 GO:0005515|GO:0005737
Phac2g04245 599 Gene3D Arf GTPase activating protein 486 597 IPR038508 -
Phac2g04245 599 PANTHER CENTAURIN/ARF 5 587 IPR045258 GO:0005096
Phac2g04245 599 MobiDBLite consensus disorder prediction 439 458 - -
Phac2g04245 599 CDD BAR_SFC_plant 15 215 IPR035670 -
Phac2g04245 599 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Phac2g04245 599 SMART arf_gap_3 499 599 IPR001164 GO:0005096
Phac2g04245 599 Coils Coil 227 247 - -
Phac2g04245 599 CDD ArfGap 502 588 - -
Phac2g04245 599 Pfam BAR domain of APPL family 6 233 IPR004148 GO:0005515|GO:0005737
Phac2g04245 599 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Phac2g04245 599 CDD PH_ACAP 295 432 - -
Phac2g04245 599 Gene3D - 285 439 IPR011993 -
Phac2g04245 599 ProSiteProfiles ARF GTPase-activating proteins domain profile. 499 582 IPR001164 GO:0005096
Phac2g04245 599 Pfam Putative GTPase activating protein for Arf 502 588 IPR001164 GO:0005096
Phac2g04245 599 Pfam PH domain 294 427 IPR001849 -
Phac2g04245 599 SUPERFAMILY ArfGap/RecO-like zinc finger 498 588 IPR037278 -
Phac2g04245 599 SMART PH_update 293 430 IPR001849 -
Phac2g04245 599 PRINTS HIV Rev interacting protein signature 511 530 IPR001164 GO:0005096
Phac2g04245 599 PRINTS HIV Rev interacting protein signature 530 547 IPR001164 GO:0005096
Phac2g04245 599 PRINTS HIV Rev interacting protein signature 553 574 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04245 Phac-Chr2 41043103 41061705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04245 505 588 C2H2 Transcription Factor Family AT4G21160 51.765 1.17e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04245 K12489 - gmx:100792517 987.252