Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04240 ATGCCTTTTCAAATCATGGATCACAGGGGCGTTTCTGCTTCATCCCACTTTTTTGAAGACGTTTCCTTTCGTTCTGAGAGGAATGTTGGACTACGGAAACCAATATCCATTAATGACCATTACCCACAAGGAAGCAATGGAATGGTAGCATCACCAGGCAGCATTTTGAACAGTACACCACCCCTTGATGTAAATGCAAAAGCTGGTTTGCTGATGTCCCAGGCTAGTCTACCTGGGAATGGTATAGATTCCAAGGAATCATTGAATTATTGTCCCAAATCATTGTCTGATGCATCTCTGCATTCGGCACCTATCTCATATGGTTTAATTGGGAACAAGATTGTGACCAGTGCTGCCCCCTGTGAAAGTAGTTTATTCTCAAGCTCTATGTCTGAGATATTTAGCCGAAAGTTACGGTTGTTTGGAAATGATGTTCAGTCTGATCAGTCTATTACTGCTGGTTTTCCTGAGGAACCATATAAATCTCTTAAAGAAATGGAGGCTGACACTATAGGGAATCTCCTTCCCGATGAAGAGGATCTGTTTTCTGGTGTTGTTGACGAGTTAGGATGCAGTTCTCATGCCAAAACAAATGATGATTTTGAAGATTTTGATCTGTTTAGCAGTGGTGGAGGCATGGAGATGGAAGGAGACGAACATTTAAGTTCAGGAAAAATGATGAATGGTCTTGATGGAGATTATGGTTTCTTTGGAGGTTCTAAAGGAAAACTTCCTTTTGGTGAACAGCCTTCTAGAACACTTTTTGTTCGAAACATTAATAGCTATGTAGAAGACTCTGAGCTAAAGGATCTCTTTGAGCAATATGGAGATATCCGAACCATTTATACAGCCTGTAAGCATCGTGGGTTTGTCATGATTTCTTATCATGATCTAAGGGCAGCACAAAATGCAATGCAAGCACTTCAAAATAGGCCATTGAGGTCTAGGAAACTTGATATACATTATTCAATTCCTAAGGTCAATGCTCCAGAAAAGGATATTGGCCATGGTACACTGATGCTATCTGGTCTTGATTCATCTGTTTTAAATGATGAGCTGAAAAAGATTTTTGGATTTTATGGAGAAATTAAAGAAATCTATGAATATCCTGAAATGAATCATCACAAATTTATTGAGTTTTATGATGTCCGAGCTGCGGAATCTGCCCTTCGTGCTTTGAATAAGATGGACATTGCTGGAAAGCAGATCAAGCTTGAACCTGGCCATCCTAGTTTGATGCACCAGTCTCATAAGGGGCAAGATGAGCGAGATTTTGGTCAAAGTATTATGGACAATTTACCATTAAGACCAAAGGCATCAGGGTCTTCTGGAGTAATTGGATCTGGTTGCTTGGAAAATGGATATAACCAGAGGTTTCAATCTACAGTGCGGCAACCTATTAATGCATTTATGGATAATGCATTCATTAATGTGAACTCTGGTATTCACAACACTGTGAGAGGGGCATCTGCTGGAAAAGTGTCTGGAGTTTGTGAGTCTAGTGGCTATGTTGATGCTATGAAATTTGCATCTAGTTCGAGATTTCATCCTCATTCCTTACCTGAGTATCATGATAGTTTAGCTAATGGTAGTCCTTATAACTTTTCTAGCACCATTAGCAACTTGGCTAACAATATAGGTGCTGGAGCTACAGAAGCCTCTGATGGTAGGCATATTCAGGGAATGGGCTCAACTGGGAACATAGCAGAATTTAATGCGGGAGGAAATGGGATACGCCCACATGGACTTTATCATATGTGGAACAGCTCTAATTTGCAACAGCAACCTTCATCTAGTAATGTGCTTTGGCAGAAATCACCATCATTTGTTAATGATGCTTGTTCTCCGAGCCTTCCACAGATGTCAAGCTTTGCTAGAACACCGCCTCATTTGCTGAGAACACCACATATGATGGACCACCATGTTGGATCAGCACCAGTTGTTACAGCCTCACCCTGGGAAAGGGCAAATTCTTATTTGGGAGGGTCCCCTGATGCTTCTGGTTTTCGCTTGGGTTCTCTAGGGAGTGGAGGTTTTCATGGTTCCTGGCAATTGCGTCCCCTGGATTTTCCTTCTCACAATGTGTTTTCTCATGTTGGTGGGAATGGCACTGAACTGACGTCCAATGCTGGACAGAACTCTCCTAAGCAGTTGTCCCATGTTTTCCCTGCGAGACATCCCATGACTTCAATGTCAAAATTTGATGCTACCAATGAACGAATGAGAAACCTTTATCACCGTAGAAATGAAGCAAGCACCAACAATGTTGATAAGAAGCAATATGAACTTGACCTAGGTCGTATATTGCGTGGGGAAGACAGCCGAACTACCCTTATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTTGCTGCAATAGATGAGCAATGTAAGGGAACTTATGATTTTCTGTATTTACCGATTGATTTCAAGAACAAATGTAATGTTGGCTATGCATTCATAAACATGATTGATCCTGGTCAAATTATTCCTTTCCATCAGGCTTTTGATGGGAAAAAATGGGAGAAATTTAATAGTGAAAAAGTAGCCTCACTGGCATATGCCCGAATTCAAGGAAAATCTTCTCTCATTGCTCATTTCCAGAACTCTAGCCTGATGAACGAAGACAAGCGTTGCCGCCCTATTCTCTTCCATACTGATGGCCCAAATGCCGGTGATCCGGAACCTTTCCCCATGGGTGCCAATATTAGACTGCGAGCCGGAAAATCTCGCATTTCCGGCAGCGAGGAGATTCGAAGCCTAGGGAGTCCTTCAGCTTTGGCAAGTGGAGAAGAGTGTGGTGAGGGGATAGACTCTTCAAAAATCTAA 2838 0.4165 MPFQIMDHRGVSASSHFFEDVSFRSERNVGLRKPISINDHYPQGSNGMVASPGSILNSTPPLDVNAKAGLLMSQASLPGNGIDSKESLNYCPKSLSDASLHSAPISYGLIGNKIVTSAAPCESSLFSSSMSEIFSRKLRLFGNDVQSDQSITAGFPEEPYKSLKEMEADTIGNLLPDEEDLFSGVVDELGCSSHAKTNDDFEDFDLFSSGGGMEMEGDEHLSSGKMMNGLDGDYGFFGGSKGKLPFGEQPSRTLFVRNINSYVEDSELKDLFEQYGDIRTIYTACKHRGFVMISYHDLRAAQNAMQALQNRPLRSRKLDIHYSIPKVNAPEKDIGHGTLMLSGLDSSVLNDELKKIFGFYGEIKEIYEYPEMNHHKFIEFYDVRAAESALRALNKMDIAGKQIKLEPGHPSLMHQSHKGQDERDFGQSIMDNLPLRPKASGSSGVIGSGCLENGYNQRFQSTVRQPINAFMDNAFINVNSGIHNTVRGASAGKVSGVCESSGYVDAMKFASSSRFHPHSLPEYHDSLANGSPYNFSSTISNLANNIGAGATEASDGRHIQGMGSTGNIAEFNAGGNGIRPHGLYHMWNSSNLQQQPSSSNVLWQKSPSFVNDACSPSLPQMSSFARTPPHLLRTPHMMDHHVGSAPVVTASPWERANSYLGGSPDASGFRLGSLGSGGFHGSWQLRPLDFPSHNVFSHVGGNGTELTSNAGQNSPKQLSHVFPARHPMTSMSKFDATNERMRNLYHRRNEASTNNVDKKQYELDLGRILRGEDSRTTLMIKNIPNKYTSKMLLAAIDEQCKGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFDGKKWEKFNSEKVASLAYARIQGKSSLIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGANIRLRAGKSRISGSEEIRSLGSPSALASGEECGEGIDSSKI* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04240 945 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 337 410 IPR000504 GO:0003723
Phac2g04240 945 SUPERFAMILY RNA-binding domain, RBD 249 407 IPR035979 GO:0003676
Phac2g04240 945 Gene3D - 246 335 IPR012677 -
Phac2g04240 945 Gene3D - 336 429 IPR012677 -
Phac2g04240 945 FunFam MEI2-like protein 5 isoform 2 241 335 - -
Phac2g04240 945 CDD RRM1_MEI2_like 251 326 IPR034453 -
Phac2g04240 945 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 252 325 IPR000504 GO:0003723
Phac2g04240 945 Pfam RNA recognition motif 2 775 871 IPR007201 -
Phac2g04240 945 SMART rrm1_1 777 853 IPR000504 GO:0003723
Phac2g04240 945 SMART rrm1_1 253 321 IPR000504 GO:0003723
Phac2g04240 945 SMART rrm1_1 338 406 IPR000504 GO:0003723
Phac2g04240 945 SUPERFAMILY RNA-binding domain, RBD 777 861 IPR035979 GO:0003676
Phac2g04240 945 CDD RRM3_MEI2_like 778 863 IPR034454 -
Phac2g04240 945 MobiDBLite consensus disorder prediction 916 945 - -
Phac2g04240 945 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 254 318 IPR000504 GO:0003723
Phac2g04240 945 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 339 404 IPR000504 GO:0003723
Phac2g04240 945 PANTHER RNA RECOGNITION MOTIF-CONTAINING 48 901 - -
Phac2g04240 945 FunFam Protein MEI2-like 1 336 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04240 Phac-Chr2 41002122 41010585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04240 250 403 Eukaryotic Initiation Factors Gene Family AT1G71770 25.767 9.83e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04240 - - gmx:100797893 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04240 2 41002122 41010585 Phac2g04240 2 41002122 41010585 ECH