Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04234 ATGCTCGCAAGGTGTTTGTTGAAATTCGTGATGTGTGTGTACGAAGGAAACGCAAGAAGACAGTATAGAGGAGTGAGACAGCGACCATGGGGGAAGTGGGCCGCGGAGATTCGCGACCCGAAGAAAGCAGCCAGAGTTTGGCTCGGAACTTTCCCCACCGCGGAGGCTGCTGCACTTGCTTACGATGAAGCAGCTCTCAGATTCAAAGGAACCAAAGCCAAGCTCAATTTTCCAGAAAAAGTTCATCTCTCAGGGGAATTAGGTTACCTCACAAATCGACCACCGTCATTACAACCTTCTTCCACTCCCTTCCAACTGCTTCCTCGTCACACTGCAACTAATAACGATGCTATTGTTTCTTCGTCTTCTTCGCCATCTTCTTCAACCTTCTCGATGAAATCCGCAGCTTCTTCTTCCGAGCCTCCTACGAAACGAACATCTGATTTCGATGCCAAACAAAAACGTTGA 468 0.4829 MLARCLLKFVMCVYEGNARRQYRGVRQRPWGKWAAEIRDPKKAARVWLGTFPTAEAAALAYDEAALRFKGTKAKLNFPEKVHLSGELGYLTNRPPSLQPSSTPFQLLPRHTATNNDAIVSSSSSPSSSTFSMKSAASSSEPPTKRTSDFDAKQKR* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04234 155 MobiDBLite consensus disorder prediction 91 155 - -
Phac2g04234 155 MobiDBLite consensus disorder prediction 91 144 - -
Phac2g04234 155 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Phac2g04234 155 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Phac2g04234 155 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Phac2g04234 155 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Phac2g04234 155 PANTHER DNA-BINDING DOMAIN 17 138 IPR044808 GO:0003700|GO:0009873
Phac2g04234 155 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Phac2g04234 155 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Phac2g04234 155 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Phac2g04234 155 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Phac2g04234 155 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04234 Phac-Chr2 40968997 40969813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04234 19 118 AP2-EREBP Transcription Factor Family AT5G61890 67.327 9.93e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g04234 AP2 9.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04234 - - vra:106766671 237.654