Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04196 ATGGGTAGAACACCCTGCTGTCAAAAACAACACATTTTTAAAGGAGCATGGTCTAAGGAGGAAGATCAACTCCTCATTAATTATGTCAACTGTCATGGAGAAGGCAATTGGAGATGCCTTCCTAAGGCAGCAGGTTTGCTTCGGTGTGGTAAAAGTTGCAGACTCAGATGGATGAATTACCTGAGACCCAACCTCAAGAAGGGGAACTTCACTCCAGAAGAAACTGATCTCATCATTCACCAGCATAGCTTACTAGGAAACAGATGGTCACAGATAGCAGCAAGTTTACCTGGAAGAACAGATAATGAGATAAAAAACTACTGGAATACCCACATCAAACGTCAGCTCTACGCCAATGGAATCGATCCTGTAACTCATAAACCACTCGACAAGGAAACCACTGAGACCACAGATCCACCTGCTAACTCTCAAGTGACCGAGATTGCCACCACAAGTGAACATGGAACTGACAACAACATCAACACTAGTTGCAGCTTCACTACTGGTGACAACCAAATCCACTGTTTTGATGTATTTCTCAATTCAAAGAATTCAAAGGTGCAGATCAGCAGTGATGATTACTCAACTGGTGATAAAGGTGAATGCTCAAACAACAGCAGTGGTGTTACCATAGAGGAAGCTCATCCTCAACTCCAACTCAACTTGAACCTTTCCTTATCTCCACCACCAAAGCCCCAAGATTTTATGGTGAACCCTGAATGGCTGCAACAACAAGGGCAACGACAAGAGCAAGTTTTGTTCCCAGGTAATGTGAATGTTAGTGGTGGTAAACAAAGTGTGTGCCTTTGGTGCAGTCTAGGGTTGCAAAGTAGTCATGCTTGTAGCAGCAAAGACAAGGGTTGTTGCACTGCTACTACAGTTGGTCCACCTGTTGGTAACCGTGATGATTGA 912 0.4386 MGRTPCCQKQHIFKGAWSKEEDQLLINYVNCHGEGNWRCLPKAAGLLRCGKSCRLRWMNYLRPNLKKGNFTPEETDLIIHQHSLLGNRWSQIAASLPGRTDNEIKNYWNTHIKRQLYANGIDPVTHKPLDKETTETTDPPANSQVTEIATTSEHGTDNNINTSCSFTTGDNQIHCFDVFLNSKNSKVQISSDDYSTGDKGECSNNSSGVTIEEAHPQLQLNLNLSLSPPPKPQDFMVNPEWLQQQGQRQEQVLFPGNVNVSGGKQSVCLWCSLGLQSSHACSSKDKGCCTATTVGPPVGNRDD* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04196 303 CDD SANT 69 112 IPR001005 -
Phac2g04196 303 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Phac2g04196 303 FunFam MYB-related transcription factor 13 66 - -
Phac2g04196 303 CDD SANT 16 61 IPR001005 -
Phac2g04196 303 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac2g04196 303 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac2g04196 303 Gene3D - 69 141 - -
Phac2g04196 303 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac2g04196 303 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac2g04196 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac2g04196 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 190 - -
Phac2g04196 303 FunFam MYB transcription factor 68 129 - -
Phac2g04196 303 SMART sant 66 114 IPR001005 -
Phac2g04196 303 SMART sant 13 63 IPR001005 -
Phac2g04196 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac2g04196 303 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04196 Phac-Chr2 40767809 40769614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04196 1 268 MYB Transcription Factor Family AT4G38620 46.269 9.11e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g04196 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04196 K09422 - gmx:100808083 284.263