Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04181 ATGGCCTTAGCCATGGTTCGTAGGAACGTCATCACCCACTACTCCAAGTTTGCATCTTCTTGGTCTGTGTTGTCTCGCCATTCCTCAATCCAAGAACCTCTCTTGGCGTCTGTTTCTTCATTTCATAGTCAATCTGTTGGTGGTGGGGGTGGTGGTGGTGGTGGTGGATTGCCATCTTACATGCGCGGAGCTGTGTTTTGGGAACCCAATAAGCCTCTTTCGATCGAGGAATTTAAGATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAGACCAAGGCCTGTGGAGTATGCCACTCTGATCTGCATGTTATGAAAGGTGAAATTCCTTTTCCCAGTCCTTGTGTTCTGGGGCATGAGATTACCGGTGAGGTTGTTGAACATGGAGCACTCTCTGACAGCAAAACAATTGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGGACCCTCTATGATGGTGAAACTAGACTCTTTCTTCGAAACAGTGGAAAACCAGTACTCATGTATAGTATGGGAGGGCTTGCTGAATACTGCGTTGTGCCAGCAAATGGAGTGTCTGTACTACCAGAATCATTGCCATATCCAAAGTCTGCTATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGCTCTAGCTGTTTACAGATAGCTAAAGCCTTTGGTGCTTCGGATATAATTGCTGTGGATGTTATGGATGAAAAGCTTCAGAAAGCAAAGACATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATATATGAAATTACTGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAAACACAGACATTTGCTCAGTGCACACTAAGTGTGAAGGATGGTGGAAAAGCCGTAATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGCAGAAAGATACAAGTTATTGGCTCGTATGGAGGCAGGGCGAGGCAAGATCTTCCAAAGCTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGACCATGCTGTTTCTAGAACATACACCTTTGAGGAGGCAGACAAAGCATTCCAAGATCTCAATGAAGGAAAAATTATTGGCCGAGCTGTGATCGAGATAAAATAA 1299 0.455 MALAMVRRNVITHYSKFASSWSVLSRHSSIQEPLLASVSSFHSQSVGGGGGGGGGGLPSYMRGAVFWEPNKPLSIEEFKMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFPSPCVLGHEITGEVVEHGALSDSKTIERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVLMYSMGGLAEYCVVPANGVSVLPESLPYPKSAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIAKAFGASDIIAVDVMDEKLQKAKTFGATHTVNSAKEDPIEKIYEITGGKGVDVAVEALGKTQTFAQCTLSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLDHAVSRTYTFEEADKAFQDLNEGKIIGRAVIEIK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04181 432 FunFam Alcohol dehydrogenase (Zinc) 65 255 - -
Phac2g04181 432 Pfam Zinc-binding dehydrogenase 261 392 IPR013149 -
Phac2g04181 432 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 118 132 IPR002328 GO:0008270|GO:0016491
Phac2g04181 432 Gene3D - 65 421 - -
Phac2g04181 432 SUPERFAMILY GroES-like 59 257 IPR011032 -
Phac2g04181 432 FunFam Sorbitol dehydrogenase 238 376 - -
Phac2g04181 432 Gene3D - 238 375 - -
Phac2g04181 432 CDD Zn_ADH10 61 430 - -
Phac2g04181 432 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 60 429 - -
Phac2g04181 432 SMART PKS_ER_names_mod 68 429 IPR020843 GO:0016491
Phac2g04181 432 Pfam Alcohol dehydrogenase GroES-like domain 86 216 IPR013154 -
Phac2g04181 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 223 396 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04181 Phac-Chr2 40678116 40682541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04181 75 431 Monolignol Biosynthesis Gene Families AT4G37990 26.519 2.46e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04181 - - gmx:100802431 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04181 2 40678116 40682541 Phac2g04181 2 40678116 40682541 ECH