Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04178 ATGCCTCTTTTAAGGAGAAAGCCTTTTTCCTTGGCTGAGCTCCCCGAGGAATTGAAGCCAGACGAGCCTGTTTACCAAATTCGATTTACAAAAGAAATCTTTCGAGATTATCCTGATTATTTGAAGCAATTGAATCTATACCGTCAGAGGGTTTGGATGTGTAAAGTCACTGGAAAAACTGGCTTGACTTATGAAGAGGCTATGGTGTCTGAACAGCATGCTACTGAGAAAGTTCAACAGTTTCCTAAGGAATTAATGACCACTGCTTTAGGGATTATTCAATACAGCATGCTCCCTTTGAAGGATCTTGCTGATTCTATTGGTGAACAGTTGCAGAAACGATTGTTTGTCGGTGCTGAACTACATGGGAAAAAGGATGATGGAGTACATCCATGTAGAATATTAAAAGTAATTCCAAAAGGAGTCAACACATTCTGTTACGAGGTAGCTTGGCTTGACAAAAACAAAAATATAACTCAACAAGCTGAACTCTGCGCAGAAGATTTGGTGCATAAGAAGCCGCTTTTTAGTAGAAATATTTTGAAGTCTTTTATTCGGGAGTCTACATACCGGAATGCCCCTTGGGTTTTACATGATGAACTAGCAAAAAATCATGGAATATCAATTGATATTCCTGAAGAATTAAGAAGAAGGGTTTTTTACAGAGATGGGCTTTTAGTTTGCTCCAAGAAAAGGAAAAATGAGGAATCACTGGAAGACACTGATAACGGTAAAAGGAAGAAGTCTGATGGGGCACAAGTCGATGATTCATGTGAAGAGAAAGGAAATGCTCGACCCAAGAAAGAAGCTATCAAATACCCCATTGATGATCTATTGGTGAAGCCTGGTCCAGATGATCCTGTTTTTACTGATCGTCCTTCTCCATCAAAAGACTTCAACATTCCAATGAGTTGTGTTGGGGGCCTCTTAATGGTTTGGGATTTGCTTAATTCCTTTGGTAGACTGTTGCACCTGTGGCCCTACTCTCTAGAAGATTTTGAAAATGCAATCTGTCATAAGGATAGCAATGTGGTTCTCCTTGTGGAATCTCATGCAGCACTTTTTCGATTTCTCATCAAAGATGACGATGAATACTCTTCGGCTGTGAAGAGCCGAAAATTGAAATCTAAGATTACAGTGAATAATTGGACAGAATATTTATGCTATTTCCTAGAGGTGATCAATATTCCTGAACTGCGGCACCATGAAGCAACTATAAAACGGGGACATTATGGCCTTGTAGATGTGAGTGCTAAATTAGAAATCTTAAGCGAATTGGTCAATCAAGCCCTTGAAACCACAGTTTTCAGGGAAAAGTTAGATGAGATTATTGAACAGCGGCAGGCACTTGGGGCCTCTAGAAGGGAAGAAGCATTGGAAAATGGTAGGAGGAGAAGAGAAGAAAAGGAGCGGTTGAAAGCTGAGTCAGGAAGCAATGGATTTGTGGATGGGCTTCTGAATGGTGCAGAAGTCCCAAGGAACAATAATCATGGTATACAAAATGGAGACATGGGTGAGAAAAGTCTTGTAGGGATAGAACCATCTGAGCAAAACAGTCAATTGGATAGAAGTGAGATCAAGCCTCAAAATTCTGCTTCAAAAAAGACACCTAAGCAGCTAAATTCAGAGCTGAAAGAACCAACCAAAAATGGAAAAGAATTATCCAGAAAGGAATCACCAAAACAGTCGAAGGCTGATAAGGAAGATCCATCAGAGAAGAACAGTGAAGAGCAGAGGAAAGAATATTTCGAAAGGGAAATGGAGAAACGATTTGTTCGAAGAAGTCCATTAGGTAAAGACAGAGATTACAATAGGTATTGGTGGTTCCGTCGAGACGGGAGGATATTTGTTGAAAGCTGCGACTCCAAAGAATGGGGATACTACAGCAGTAAGGAAGAGATCGATGCATTGATGAGTTCACTGAATTGCAAGGGTGAGCGGGAAAGGGCACTGCGAAAGCAACTACAAAAATATTATACTAAAATATGCTCAGAACTCCATAAAAGGTCAAAGGATTTGATGCACAGGATTACAGATGAATCTGTGCTTCGAAGGTCTACTCGTGTTAGAGCTCCACCTAGGCAGAACCCTGCCAATGCTTTCCTCAGATATGCTAACAAGTGGAAAGAAGAATAG 2136 0.405 MPLLRRKPFSLAELPEELKPDEPVYQIRFTKEIFRDYPDYLKQLNLYRQRVWMCKVTGKTGLTYEEAMVSEQHATEKVQQFPKELMTTALGIIQYSMLPLKDLADSIGEQLQKRLFVGAELHGKKDDGVHPCRILKVIPKGVNTFCYEVAWLDKNKNITQQAELCAEDLVHKKPLFSRNILKSFIRESTYRNAPWVLHDELAKNHGISIDIPEELRRRVFYRDGLLVCSKKRKNEESLEDTDNGKRKKSDGAQVDDSCEEKGNARPKKEAIKYPIDDLLVKPGPDDPVFTDRPSPSKDFNIPMSCVGGLLMVWDLLNSFGRLLHLWPYSLEDFENAICHKDSNVVLLVESHAALFRFLIKDDDEYSSAVKSRKLKSKITVNNWTEYLCYFLEVINIPELRHHEATIKRGHYGLVDVSAKLEILSELVNQALETTVFREKLDEIIEQRQALGASRREEALENGRRRREEKERLKAESGSNGFVDGLLNGAEVPRNNNHGIQNGDMGEKSLVGIEPSEQNSQLDRSEIKPQNSASKKTPKQLNSELKEPTKNGKELSRKESPKQSKADKEDPSEKNSEEQRKEYFEREMEKRFVRRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSSKEEIDALMSSLNCKGERERALRKQLQKYYTKICSELHKRSKDLMHRITDESVLRRSTRVRAPPRQNPANAFLRYANKWKEE* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04178 711 Coils Coil 455 475 - -
Phac2g04178 711 MobiDBLite consensus disorder prediction 236 266 - -
Phac2g04178 711 MobiDBLite consensus disorder prediction 512 538 - -
Phac2g04178 711 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 658 IPR028941 -
Phac2g04178 711 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Phac2g04178 711 SMART testlast3 303 364 IPR018501 -
Phac2g04178 711 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 709 - -
Phac2g04178 711 Pfam DDT domain 304 361 IPR018501 -
Phac2g04178 711 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
Phac2g04178 711 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Phac2g04178 711 MobiDBLite consensus disorder prediction 451 476 - -
Phac2g04178 711 MobiDBLite consensus disorder prediction 451 581 - -
Phac2g04178 711 MobiDBLite consensus disorder prediction 539 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04178 Phac-Chr2 40667869 40677363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04178 567 657 Homeobox Transcription Factor Family AT1G28420 39.000 2.48e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac2g04178 WAC_Acf1_DNA_bd 8.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04178 - - var:108323886 1290.02