LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g04165	ATGGGAAGTCCTCCGGTGAATGCGTCGGCAGTAGCATACGAAGCATGGACAAGCCTGGCGGTGCCAGATTGGTTGAACAAAGGAGACAACGCATGGCAAATGGTGTCAGCCACGTTGGTGGGGATCCAAAGCATGCCGGGCCTCGTCATTCTCTACGGAAGCATCGTCAAAAAGAAATGGGCCGTCAACTCTGCCTTCATGGCTCTTTACGCTTTTGCGGCGGTTGTCATCTGCTGGGTCACTTGGGCCTACAAGATGTCCTTCGGGGAGAAGCTGCTGCCGTTTTGGGGCAAGGCTGGGCCGGCGCTGGGCCAGAGGTTTCTCATCAAGCAGGCGGCCCTCCCCGCCACGCCGCACTACTTCAGTAACGGCGAGTTGGAGACGGCGGAGATCGAACCCTTTTACCCCATGGCTACTATGGTGTGGTTCCAGTGCGTGTTTGCGGCCATTGCTCTTGTCATCTTGGCTGGCTCCGTTCTTGCTCGGATGAACTTCAAGGCCTGGATGATGTTCGTGCCTCTCTGGCTCACTTTCTCTTACACCATCGGCGCCTTCAGCTTGTGGGGCGGAGGCTTCTTGTTCCACTGGGGCGTCATCGACTACTCCGGCGGTTACGTCATTCATCTCTCTTCTGGGATTGCTGGCTTCACTGCAGCATATTGGGTGGGGCCAAGATCGAAGAGAGACAGAGAGAGGTTCCCGCCAAACAATGTGTTACTGATGTTGGCAGGTGCGGGGCTGCTATGGTTGGGATGGGCGGGTTTCAACGGAGGAGATCCCTACGCGGCGAACACGGACTCATCGATAGCGGTGCTGAACACCAACGTTTGCGCCGCCACCAGCCTCCTCGTATGGACCTGGTTGGACGTTATTTTCTTCAAAAAGCCCTCAGTTATTGGAGCCGTTCAGGGCATGATAACAGGCCTTGTTTGCATCACTCCCGGAGCTGGTGTGGTTCAAGGATGGGCTGCCATAGTGATGGGAGTGCTTTCAGGAAGTATCCCATGGTTCAGCATGATGGTACTGGGAAAAAAGTTGAAAATATTTCAAATGGTTGATGACACCCTTGCTGTGTTCCACACTCATGCTGTGGCTGGCCTCCTTGGAGGAATACTCACTGGCCTATTTGCTGAGCCACATCTAAGCACACTCTTTCTTCCTGTCACCAATTCCAAAGGAGGAATCTATGGAGGCCCTGGAGGAATCCAGATTCTTAAGCAAATTGTAGGAGCTCTCTTCATCATTGGGTGGAACCTTGTGGCCACTTCAATTATTTGTGTGCTTATTAACTTCTTAGTTCCACTTAGAATGTCAGAGGAAGAGCTTCTCATTGGGGATGATGCAGTTCATGGGGAAGAGGCTTATGCACTGTGGGGTGATGGAGAGAAACTTAGCATCTACAAAGATGATACCACACACCATGGAATGGTGTCTAGTGGTGCCACTCAAGTGGTCTAA	1458	0.5267	MGSPPVNASAVAYEAWTSLAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGEKLLPFWGKAGPALGQRFLIKQAALPATPHYFSNGELETAEIEPFYPMATMVWFQCVFAAIALVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRSKRDRERFPPNNVLLMLAGAGLLWLGWAGFNGGDPYAANTDSSIAVLNTNVCAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGVVQGWAAIVMGVLSGSIPWFSMMVLGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPHLSTLFLPVTNSKGGIYGGPGGIQILKQIVGALFIIGWNLVATSIICVLINFLVPLRMSEEELLIGDDAVHGEEAYALWGDGEKLSIYKDDTTHHGMVSSGATQVV*	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g04165	485	ProSitePatterns	Ammonium transporters signature.	200	225	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Phac2g04165	485	PANTHER	AMMONIUM TRANSPORTER MEP2	16	464	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Phac2g04165	485	Pfam	Ammonium Transporter Family	31	455	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Phac2g04165	485	FunFam	Ammonium transporter	12	458	-	-
	Phac2g04165	485	Gene3D	Ammonium transporter AmtB like domains	6	458	IPR029020	-
	Phac2g04165	485	NCBIfam	ammonium transporter	29	455	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Phac2g04165	485	PRINTS	Rhesus blood group protein signature	270	292	IPR002229	GO:0005886
	Phac2g04165	485	PRINTS	Rhesus blood group protein signature	239	257	IPR002229	GO:0005886
	Phac2g04165	485	PRINTS	Rhesus blood group protein signature	325	343	IPR002229	GO:0005886
	Phac2g04165	485	PRINTS	Rhesus blood group protein signature	144	160	IPR002229	GO:0005886
	Phac2g04165	485	SUPERFAMILY	Ammonium transporter	24	437	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g04165	Phac-Chr2	40586494	40590932	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g04165	137	474	Inorganic Solute Cotransporters	AT2G38290	71.598	1.55e-167	475

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g04165	K03320		-	gmx:100785993	916.376