Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04134 ATGGGTGACGGAAGTGGGAGCCGGTGGAGCAGGGCGGAGTGGGTGCAGCAGTACGATCTGTTAGGTAAAATCGGCGAAGGCACTTATGGCCTCGTTTTTCTGGCAAGAACCAAAACCCCTTCTCCCTCCAAATCCATCGCCATCAAGAAGTTCAAGCAGTCTAAGGACGGGGACGGCGTCTCCCCCACCGCCATCCGAGAAATCATGTTGTTGAGGGAGATTACGCACGAGAACGTCGTGAAGCTCGTCAATGTCCACATCAACCACGCCGACATGTCGCTCTACCTCGCCTTCGATTACGCCGAGCACGATCTTTATGAAATTATTAGGCATCACAGGGACAAACTCAACCATTCCATTAATCAATACACCGTTAAGTCTTTGCTCTGGCAGTTACTCAATGGATTGAGTTATCTGCACAGTAATTGGATGATACACCGAGATTTGAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAGGAGCATGGAGTTGTTAAGATTGCTGACTTTGGACTTGCAAGGATATATCAAGCTCCTCTGAAGCCACTATCTGATAATGGGGTTGTTGTAACTATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCAGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCGTTTCAGCTTGACCAACTTGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCGTTGGCAAGTCTTCAACATTGGCAACAAGATGTGCAACATATACAAGGACGCAAATATGACAACACTGGTCTCTATAATGTTGTGCACCTATCTACAAAAAGTCCTGCATACGACCTCTTGTCAAAGATGCTCGAATATGATCCTCGAAAGCGTATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCTCTTGTACCATGTCAACTTGGAGAGAAAATTGTAAATTATCCCACTCGTCCAGTGGACAACACAACTGATCTTGAAGGGACAACCAATCTGCCACCTTCACAAGCGGTAACTGCAGTTTCTGGCAGCATGCCTGGTGCTCATGGGTCTAATAGATCTGTCCCTCGGCCAATGAATGTTGTTGGAATGCCAAGATTGCCACCTCAGGCAATGGCGGCTTATAATCTCACATCTCAGGCAGCCATGGGAGACGGAATGAATCCTGGGAGTATCTCAAAGCAACGAGGTGTTCCACAGGGCCATCCACAACAGTTGAGAAGGAAAGAGCAAATGGGGATGCCAGGATACCCTTCACAACAGAAGTCAAGACGAATATAA 1386 0.4618 MGDGSGSRWSRAEWVQQYDLLGKIGEGTYGLVFLARTKTPSPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLGHPTLEKWPSLASLQHWQQDVQHIQGRKYDNTGLYNVVHLSTKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDNTTDLEGTTNLPPSQAVTAVSGSMPGAHGSNRSVPRPMNVVGMPRLPPQAMAAYNLTSQAAMGDGMNPGSISKQRGVPQGHPQQLRRKEQMGMPGYPSQQKSRRI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04134 461 Pfam Protein kinase domain 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04134 461 MobiDBLite consensus disorder prediction 416 461 - -
Phac2g04134 461 FunFam Putative cyclin-dependent kinase E-1 101 340 - -
Phac2g04134 461 CDD STKc_CDK8_like 17 327 - -
Phac2g04134 461 ProSiteProfiles Protein kinase domain profile. 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04134 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Phac2g04134 461 Gene3D Phosphorylase Kinase; domain 1 5 99 - -
Phac2g04134 461 Gene3D Transferase(Phosphotransferase) domain 1 100 343 - -
Phac2g04134 461 ProSitePatterns Protein kinases ATP-binding region signature. 24 50 IPR017441 GO:0005524
Phac2g04134 461 FunFam Cyclin-dependent kinase e-1 6 100 - -
Phac2g04134 461 PANTHER CELL DIVISION PROTEIN KINASE 16 333 - -
Phac2g04134 461 SUPERFAMILY Protein kinase-like (PK-like) 13 328 IPR011009 -
Phac2g04134 461 SMART serkin_6 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04134 Phac-Chr2 40445380 40456254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04134 11 461 Core Cell Cycle Gene Families AT5G63610 76.419 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Phac2g04134 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04134 K02208 - gmx:100794990 899.042